RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
TMEM53-209ENST00000495630 RGS22Q8NE09 1264 aa20.65■□□□□ 0.9
TMEM53-209ENST00000495630 RAPGEFL1Q9UHV5 662 aa20.65■□□□□ 0.9
TMEM53-209ENST00000495630 COG5Q9UP83 839 aa20.65■□□□□ 0.9
TMEM53-209ENST00000495630 WDR19Q8NEZ3 1342 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 TXNP10599 105 aaKnown RBP20.64■□□□□ 0.89
TMEM53-209ENST00000495630 TAP1Q03518 808 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 RRP12Q5JTH9 1297 aaKnown RBP20.64■□□□□ 0.89
TMEM53-209ENST00000495630 HERC6Q8IVU3 1022 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 NECAB3Q96P71 396 aaPredicted RBP20.64■□□□□ 0.89
TMEM53-209ENST00000495630 MAF1Q9H063 256 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 CERS4Q9HA82 394 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 NOD1Q9Y239 953 aa20.64■□□□□ 0.89
TMEM53-209ENST00000495630 BAIAP3O94812 1187 aa20.63■□□□□ 0.89
TMEM53-209ENST00000495630 KCNQ1P51787 676 aa20.63■□□□□ 0.89
TMEM53-209ENST00000495630 COPS5Q92905 334 aa20.63■□□□□ 0.89
TMEM53-209ENST00000495630 LRRC37A2A6NM11 1700 aa20.63■□□□□ 0.89
TMEM53-209ENST00000495630 BDP1A6H8Y1 2624 aa20.63■□□□□ 0.89
TMEM53-209ENST00000495630 SALL3Q9BXA9 1300 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 EPOPA6NHQ4 379 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 SNHG28P0DPA3 235 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
TMEM53-209ENST00000495630 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 ARNTL2Q8WYA1 636 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 ZBTB47Q9UFB7 747 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-209ENST00000495630 GBF1Q92538 1859 aa20.62■□□□□ 0.89
TMEM53-209ENST00000495630 PTGISQ16647 500 aa20.61■□□□□ 0.89
TMEM53-209ENST00000495630 CCDC62Q6P9F0 684 aa20.61■□□□□ 0.89
TMEM53-209ENST00000495630 CCDC155Q8N6L0 562 aa20.61■□□□□ 0.89
TMEM53-209ENST00000495630 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
TMEM53-209ENST00000495630 PPP1R13LQ8WUF5 828 aa20.61■□□□□ 0.89
TMEM53-209ENST00000495630 PRRC2BQ5JSZ5 2229 aaKnown RBP20.61■□□□□ 0.89
TMEM53-209ENST00000495630 SCN10AQ9Y5Y9 1956 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 TLL1O43897 1013 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 PARNO95453 639 aaKnown RBP20.6■□□□□ 0.89
TMEM53-209ENST00000495630 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
TMEM53-209ENST00000495630 PLA2G5P39877 138 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 GPATCH4Q5T3I0 446 aaKnown RBP20.6■□□□□ 0.89
TMEM53-209ENST00000495630 SESTD1Q86VW0 696 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 HLA-CQ95604 372 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 FAM122AQ96E09 287 aa20.6■□□□□ 0.89
TMEM53-209ENST00000495630 XIRP2A4UGR9 3374 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 LCTP09848 1927 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 ARHGEF15O94989 841 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 ARIH2O95376 493 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 KCNJ6P48051 423 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 ANKRD45Q5TZF3 282 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 KRT40Q6A162 431 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 AFG1LQ8WV93 481 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 LMCD1Q9NZU5 365 aa20.59■□□□□ 0.89
TMEM53-209ENST00000495630 ZMYM6O95789 1325 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 GH1P01241 217 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 CASTP20810 708 aaKnown RBP20.58■□□□□ 0.89
TMEM53-209ENST00000495630 CHMP4BP1P59074 171 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 GRB10Q13322 594 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 FAM227BQ96M60 508 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 IWS1Q96ST2 819 aa20.58■□□□□ 0.89
TMEM53-209ENST00000495630 TRANK1O15050 2925 aa20.58■□□□□ 0.88
TMEM53-209ENST00000495630 REV3LO60673 3130 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 SELPP16109 830 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 PDE1AP54750 535 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 GPNMBQ14956 572 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 USH1GQ495M9 461 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 GDF6Q6KF10 455 aaPredicted RBP20.57■□□□□ 0.88
TMEM53-209ENST00000495630 DGKHQ86XP1 1220 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 NSUN6Q8TEA1 469 aaKnown RBP20.57■□□□□ 0.88
TMEM53-209ENST00000495630 CTAGE1Q96RT6 745 aa20.57■□□□□ 0.88
TMEM53-209ENST00000495630 RNF41Q9H4P4 317 aaPredicted RBP20.57■□□□□ 0.88
TMEM53-209ENST00000495630 ARIH1Q9Y4X5 557 aaPredicted RBP20.57■□□□□ 0.88
TMEM53-209ENST00000495630 TCF20Q9UGU0 1960 aaKnown RBP20.57■□□□□ 0.88
TMEM53-209ENST00000495630 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 LPXNO60711 386 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 MMP3P08254 477 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 NT5C2P49902 561 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 HAND2P61296 217 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
TMEM53-209ENST00000495630 RBL2Q08999 1139 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 STXBP2Q15833 593 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 LY6KQ17RY6 165 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 SEPT14Q6ZU15 432 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 MCF2L2Q86YR7 1114 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 ESR2Q92731 530 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 KAT2BQ92831 832 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 TAAR1Q96RJ0 339 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 ZBED2Q9BTP6 218 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 UBA5Q9GZZ9 404 aa20.56■□□□□ 0.88
TMEM53-209ENST00000495630 SCN5AQ14524 2016 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 ABHD14A-ACY1A0A1B0GW23 586 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 CXCL10P02778 98 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 GOLGA8HP0CJ92 632 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 ARHGAP1Q07960 439 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 DGKDQ16760 1214 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 CNKSR3Q6P9H4 555 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 SYTL5Q8TDW5 730 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-209ENST00000495630 TBC1D5Q92609 795 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms