RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 ABCB11O95342 1321 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 ZEB2O60315 1214 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 DNAJB2P25686 324 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 CCDC62Q6P9F0 684 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 TMEM199Q8N511 208 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 OR6J1Q8NGC5 347 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 MTMR8Q96EF0 704 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 CNNM2Q9H8M5 875 aa21.08■□□□□ 0.97
YIPF4-204ENST00000495355 CUL9Q8IWT3 2517 aa21.08■□□□□ 0.96
YIPF4-204ENST00000495355 KIAA1217Q5T5P2 1943 aa21.08■□□□□ 0.96
YIPF4-204ENST00000495355 GBF1Q92538 1859 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.07■□□□□ 0.96
YIPF4-204ENST00000495355 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.07■□□□□ 0.96
YIPF4-204ENST00000495355 DLL1O00548 723 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 PARP1P09874 1014 aaKnown RBP21.07■□□□□ 0.96
YIPF4-204ENST00000495355 PBX2P40425 430 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 PPP2R5BQ15173 497 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 STOX1Q6ZVD7 989 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 SCFD2Q8WU76 684 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 IL23AQ9NPF7 189 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 TRMT13Q9NUP7 481 aaKnown RBP21.07■□□□□ 0.96
YIPF4-204ENST00000495355 CXXC1Q9P0U4 656 aaPredicted RBP21.07■□□□□ 0.96
YIPF4-204ENST00000495355 MAD2L2Q9UI95 211 aa21.07■□□□□ 0.96
YIPF4-204ENST00000495355 TMEM265A0A087WTH1 108 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 A6NJR5 290 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 MYL3P08590 195 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 CCL23P55773 120 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 IFIT1BQ5T764 474 aaKnown RBP21.06■□□□□ 0.96
YIPF4-204ENST00000495355 SEZ6LQ9BYH1 1024 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 VAT1LQ9HCJ6 419 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 POLR3EQ9NVU0 708 aa21.06■□□□□ 0.96
YIPF4-204ENST00000495355 SCN5AQ14524 2016 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 PALM3A6NDB9 673 aaPredicted RBP21.05■□□□□ 0.96
YIPF4-204ENST00000495355 NKRFO15226 690 aaKnown RBP eCLIP21.05■□□□□ 0.96
YIPF4-204ENST00000495355 TXNP10599 105 aaKnown RBP21.05■□□□□ 0.96
YIPF4-204ENST00000495355 CPT1AP50416 773 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 GHRHRQ02643 423 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 GRIN2CQ14957 1233 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 PSRC1Q6PGN9 363 aaPredicted RBP21.05■□□□□ 0.96
YIPF4-204ENST00000495355 FBXO11Q86XK2 927 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 HERVK_113Q902F9 699 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 PBX4Q9BYU1 374 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 MAF1Q9H063 256 aa21.05■□□□□ 0.96
YIPF4-204ENST00000495355 SGSM2O43147 1006 aa21.04■□□□□ 0.96
YIPF4-204ENST00000495355 CYP2C9P11712 490 aa21.04■□□□□ 0.96
YIPF4-204ENST00000495355 NBPF20Q3BBV1 942 aa21.04■□□□□ 0.96
YIPF4-204ENST00000495355 SCLYQ96I15 445 aa21.04■□□□□ 0.96
YIPF4-204ENST00000495355 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
YIPF4-204ENST00000495355 SPTBN5Q9NRC6 3674 aaKnown RBP21.04■□□□□ 0.96
YIPF4-204ENST00000495355 BAZ2BQ9UIF8 2168 aaKnown RBP21.03■□□□□ 0.96
YIPF4-204ENST00000495355 TANC1Q9C0D5 1861 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 KLRF2D3W0D1 207 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 HSD17B4P51659 736 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 ANTXR2P58335 489 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 ARHGAP1Q07960 439 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
YIPF4-204ENST00000495355 LY6KQ17RY6 165 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.03■□□□□ 0.96
YIPF4-204ENST00000495355 MAFAQ8NHW3 353 aaPredicted RBP21.03■□□□□ 0.96
YIPF4-204ENST00000495355 CHD7Q9P2D1 2997 aa21.03■□□□□ 0.96
YIPF4-204ENST00000495355 E7EWF7 191 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 CYTH3O43739 400 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
YIPF4-204ENST00000495355 TTLL4Q14679 1199 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 GRM4Q14833 912 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 NSUN6Q8TEA1 469 aaKnown RBP21.02■□□□□ 0.96
YIPF4-204ENST00000495355 TIFAQ96CG3 184 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 CTAGE1Q96RT6 745 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 RMDN3Q96TC7 470 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 ZNF576Q9H609 170 aa21.02■□□□□ 0.96
YIPF4-204ENST00000495355 MRPL11Q9Y3B7 192 aaKnown RBP21.02■□□□□ 0.96
YIPF4-204ENST00000495355 RBAK-RBAKDNI3L0D1 243 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 RGS20O76081 388 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 EIF2AK2P19525 551 aaKnown RBP21.01■□□□□ 0.95
YIPF4-204ENST00000495355 TROAPQ12815 778 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 SEPT14Q6ZU15 432 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 OTOP2Q7RTS6 562 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 AFG1LQ8WV93 481 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 KAT2BQ92831 832 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 MPHOSPH6Q99547 160 aaKnown RBP21.01■□□□□ 0.95
YIPF4-204ENST00000495355 AMNQ9BXJ7 453 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 PXMP2Q9NR77 195 aa21.01■□□□□ 0.95
YIPF4-204ENST00000495355 ZBTB5O15062 677 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 CFBP00751 764 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 FGBP02675 491 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 MMP3P08254 477 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 FOSL2P15408 326 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 MB21D2Q8IYB1 491 aaPredicted RBP21■□□□□ 0.95
YIPF4-204ENST00000495355 IL31RAQ8NI17 732 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 MAP4K1Q92918 833 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 IWS1Q96ST2 819 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 RIOX1Q9H6W3 641 aa21■□□□□ 0.95
YIPF4-204ENST00000495355 YBX2Q9Y2T7 364 aaKnown RBP21■□□□□ 0.95
YIPF4-204ENST00000495355 U3KPZ7 1027 aaPredicted RBP21■□□□□ 0.95
YIPF4-204ENST00000495355 NR3C2P08235 984 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 STXBP2Q15833 593 aa20.99■□□□□ 0.95
YIPF4-204ENST00000495355 NFRKBQ6P4R8 1299 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms