RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 SAFB2Q14151 953 aaKnown RBP eCLIP8.67□□□□□ -1.02
SREK1IP1-201ENST00000495198 CDC42BPGQ6DT37 1551 aa8.67□□□□□ -1.02
SREK1IP1-201ENST00000495198 TP53I13Q8NBR0 393 aaPredicted RBP8.67□□□□□ -1.02
SREK1IP1-201ENST00000495198 PLCD4Q9BRC7 762 aa8.67□□□□□ -1.02
SREK1IP1-201ENST00000495198 MIR1-1HGQ9H1L0 117 aa8.67□□□□□ -1.02
SREK1IP1-201ENST00000495198 USP32Q8NFA0 1604 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 DNAJA2O60884 412 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 ZC3H6P61129 1189 aaKnown RBP8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 YBX1P67809 324 aaKnown RBP8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 POGKQ9P215 609 aa8.66□□□□□ -1.02
SREK1IP1-201ENST00000495198 ADGRF5Q8IZF2 1346 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 TMEM82A0PJX8 343 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 FAM83GA6ND36 823 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 NRDCO43847 1150 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 SASH1O94885 1247 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 PLCG1P19174 1290 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 EFEMP1Q12805 493 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 PMFBP1Q8TBY8 1022 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 HDAC8Q9BY41 377 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 TGIF2Q9GZN2 237 aa8.65□□□□□ -1.02
SREK1IP1-201ENST00000495198 KIF1AQ12756 1690 aa8.65□□□□□ -1.03
SREK1IP1-201ENST00000495198 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 ARHGEF10O15013 1369 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 PPLO60437 1756 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 FAM129CQ86XR2 697 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 IGDCC3Q8IVU1 814 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 SLFN12Q8IYM2 578 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 MAP6Q96JE9 813 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 HHIPL1Q96JK4 782 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 PLCH1Q4KWH8 1693 aa8.64□□□□□ -1.03
SREK1IP1-201ENST00000495198 PLEKHH1Q9ULM0 1364 aa8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 EZH2Q15910 746 aaKnown RBP8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 DDX41Q9UJV9 622 aaKnown RBP8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 RGPD8O14715 1765 aaPredicted RBP8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
SREK1IP1-201ENST00000495198 GPRASP1Q5JY77 1395 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 CHURC1-FNTBB4DL54 471 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 EVA1CP58658 441 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 RACK1P63244 317 aaKnown RBP8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 HS2ST1Q7LGA3 356 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 ASPNQ9BXN1 380 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 FOXP3Q9BZS1 431 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 TMPRSS5Q9H3S3 457 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 CRTAC1Q9NQ79 661 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 PRDM11Q9NQV5 511 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 SIRT5Q9NXA8 310 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 RGPD1P0DJD0 1748 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 FMN2Q9NZ56 1722 aa8.62□□□□□ -1.03
SREK1IP1-201ENST00000495198 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 ANKRD30BQ9BXX2 1392 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 RAB3GAP2Q9H2M9 1393 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 FAM221AA4D161 298 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 IGSF3O75054 1194 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 NAALADL2Q58DX5 795 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 FAM196AQ6ZSG2 479 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 NGDNQ8NEJ9 315 aaKnown RBP8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 MZB1Q8WU39 189 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 PRAM1Q96QH2 718 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 RSRP1Q9BUV0 290 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 KLHL14Q9P2G3 628 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 POLR3KQ9Y2Y1 108 aaPredicted RBP8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 PRAG1Q86YV5 1406 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
SREK1IP1-201ENST00000495198 CILPO75339 1184 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 LMNB1P20700 586 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 RPL10P27635 214 aaKnown RBP8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 BBS9Q3SYG4 887 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 PHC3Q8NDX5 983 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 TEPSINQ96N21 525 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 YTHDC2Q9H6S0 1430 aaKnown RBP8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
SREK1IP1-201ENST00000495198 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 PRICKLE3O43900 615 aaPredicted RBP8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 ERVFRD-1P60508 538 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 ZNF394Q53GI3 561 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 RNF111Q6ZNA4 994 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 CEP128Q6ZU80 1094 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 USP48Q86UV5 1035 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 TINF2Q9BSI4 451 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 HIRIP3Q9BW71 556 aaPredicted RBP8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
SREK1IP1-201ENST00000495198 SPATA31A5Q5VU36 1347 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms