RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 CABP7Q86V35 215 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 WDR66Q8TBY9 1149 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
TRIM2-209ENST00000494872 CAVIN3Q969G5 261 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
TRIM2-209ENST00000494872 FLT1P17948 1338 aa13.21□□□□□ -0.3
TRIM2-209ENST00000494872 EIF3HO15372 352 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM2-209ENST00000494872 PLCG1P19174 1290 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 TM4SF1P30408 202 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 GSTO1P78417 241 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 PJA2O43164 708 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
TRIM2-209ENST00000494872 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 KIF11P52732 1056 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 ASIC1P78348 528 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 SKOR1P84550 965 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 INF2Q27J81 1249 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
TRIM2-209ENST00000494872 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 STIM2Q9P246 746 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 ARHGAP20Q9P2F6 1191 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
TRIM2-209ENST00000494872 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 MYH1P12882 1939 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 BAG3O95817 575 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 OR52Z1P0C646 297 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 STK4Q13043 487 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 ARHGAP27Q6ZUM4 889 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 STAG2Q8N3U4 1231 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 RUFY1Q96T51 708 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 RNF14Q9UBS8 474 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 DMGDHQ9UI17 866 aaKnown RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 STXBP3O00186 592 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 HSF2BPO75031 334 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 CCT5P48643 541 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 PPP4CP60510 307 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 APBA1Q02410 837 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 KRT26Q7Z3Y9 468 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
TRIM2-209ENST00000494872 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 PLIN2Q99541 437 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 EDEM3Q9BZQ6 932 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
TRIM2-209ENST00000494872 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 ATXN2Q99700 1313 aaKnown RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 CCDC88AQ3V6T2 1871 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 GNPATO15228 680 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 MOCS3O95396 460 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 LDHCP07864 332 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 PLEKP08567 350 aaPredicted RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 GTF2A1P52655 376 aaPredicted RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 HAUS3Q68CZ6 603 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 RNF10Q8N5U6 811 aaKnown RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 BCAS4Q8TDM0 211 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
TRIM2-209ENST00000494872 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
TRIM2-209ENST00000494872 AKR1B10O60218 316 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 EIF4A3P38919 411 aaKnown RBP13.17□□□□□ -0.3
TRIM2-209ENST00000494872 GNGT1P63211 74 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 EZH2Q15910 746 aaKnown RBP13.17□□□□□ -0.3
TRIM2-209ENST00000494872 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
TRIM2-209ENST00000494872 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms