RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 STARD7Q9NQZ5 370 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 GCOM1H8Y6P7 765 aaPredicted RBP25.34■■□□□ 1.65
HPS3-207ENST00000494327 POLR2MP0CAP2 368 aa25.34■■□□□ 1.65
HPS3-207ENST00000494327 CST5P28325 142 aaPredicted RBP25.34■■□□□ 1.65
HPS3-207ENST00000494327 KLF18A0A0U1RQI7 1052 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 hCG_1642624A0A1W2PR95 340 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 CTAGE5O15320 804 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 ZBTB43O43298 467 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 DUSP28Q4G0W2 176 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 HABP4Q5JVS0 413 aaKnown RBP25.33■■□□□ 1.65
HPS3-207ENST00000494327 Q6ZUG5 572 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 FCHSD1Q86WN1 690 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 GLT1D1Q96MS3 346 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 MAP3K20Q9NYL2 800 aaKnown RBP25.33■■□□□ 1.65
HPS3-207ENST00000494327 MYH6P13533 1939 aa25.33■■□□□ 1.65
HPS3-207ENST00000494327 RBM47A0AV96 593 aaKnown RBP25.32■■□□□ 1.64
HPS3-207ENST00000494327 PSMA5P28066 241 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 STXBP2Q15833 593 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 FSCN1Q16658 493 aaKnown RBP25.32■■□□□ 1.64
HPS3-207ENST00000494327 SEPT14Q6ZU15 432 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 TMTC3Q6ZXV5 915 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 IWS1Q96ST2 819 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 USP26Q9BXU7 913 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 PXMP2Q9NR77 195 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
HPS3-207ENST00000494327 PRKAG2Q9UGJ0 569 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 Q9Y3F1 56 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 LRRC37A2A6NM11 1700 aa25.32■■□□□ 1.64
HPS3-207ENST00000494327 CASTP20810 708 aaKnown RBP25.31■■□□□ 1.64
HPS3-207ENST00000494327 TLE2Q04725 743 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 SNX17Q15036 470 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 PPP2R5BQ15173 497 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 RTN1Q16799 776 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 SAMD3Q8N6K7 520 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 SCFD2Q8WU76 684 aa25.31■■□□□ 1.64
HPS3-207ENST00000494327 PRDM5Q9NQX1 630 aaPredicted RBP25.31■■□□□ 1.64
HPS3-207ENST00000494327 RBM28Q9NW13 759 aaKnown RBP25.31■■□□□ 1.64
HPS3-207ENST00000494327 BAZ2BQ9UIF8 2168 aaKnown RBP25.31■■□□□ 1.64
HPS3-207ENST00000494327 GOLGA8AA7E2F4 631 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 GOLGA8BA8MQT2 603 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 EPB41L2O43491 1005 aaKnown RBP25.3■■□□□ 1.64
HPS3-207ENST00000494327 ZEB2O60315 1214 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 NR3C2P08235 984 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 TXNP10599 105 aaKnown RBP25.3■■□□□ 1.64
HPS3-207ENST00000494327 MYCLP12524 364 aaPredicted RBP25.3■■□□□ 1.64
HPS3-207ENST00000494327 RPS6KB1P23443 525 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 MAGEA10P43363 369 aaPredicted RBP25.3■■□□□ 1.64
HPS3-207ENST00000494327 NKX3-2P78367 333 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 GHRHRQ02643 423 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 APOBRQ0VD83 1088 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 OR6J1Q8NGC5 347 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 BRF1Q92994 677 aa25.3■■□□□ 1.64
HPS3-207ENST00000494327 PQBP1O60828 265 aaKnown RBP25.29■■□□□ 1.64
HPS3-207ENST00000494327 TTLL4Q14679 1199 aa25.29■■□□□ 1.64
HPS3-207ENST00000494327 C1orf53Q5VUE5 145 aa25.29■■□□□ 1.64
HPS3-207ENST00000494327 CXCL17Q6UXB2 119 aa25.29■■□□□ 1.64
HPS3-207ENST00000494327 COPS5Q92905 334 aa25.29■■□□□ 1.64
HPS3-207ENST00000494327 MDM2Q00987 491 aaPredicted RBP25.28■■□□□ 1.64
HPS3-207ENST00000494327 GDF15Q99988 308 aa25.28■■□□□ 1.64
HPS3-207ENST00000494327 PDCD2LQ9BRP1 358 aa25.28■■□□□ 1.64
HPS3-207ENST00000494327 ELP1O95163 1332 aa25.28■■□□□ 1.64
HPS3-207ENST00000494327 NKRFO15226 690 aaKnown RBP eCLIP25.27■■□□□ 1.64
HPS3-207ENST00000494327 EIF3JO75822 258 aaKnown RBP25.27■■□□□ 1.64
HPS3-207ENST00000494327 ARIH2O95376 493 aa25.27■■□□□ 1.64
HPS3-207ENST00000494327 SMARCC2Q8TAQ2 1214 aa25.27■■□□□ 1.64
HPS3-207ENST00000494327 CUL5Q93034 780 aa25.27■■□□□ 1.64
HPS3-207ENST00000494327 ZFP91Q96JP5 570 aaPredicted RBP25.27■■□□□ 1.64
HPS3-207ENST00000494327 A0A0U1RQG5 324 aaPredicted RBP25.26■■□□□ 1.63
HPS3-207ENST00000494327 PGM5Q15124 567 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 LY6KQ17RY6 165 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 USP17L6PQ6QN14 398 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 HEATR3Q7Z4Q2 680 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 SH3RF1Q7Z6J0 888 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 LBHD1Q9BQE6 289 aaPredicted RBP25.26■■□□□ 1.63
HPS3-207ENST00000494327 PRO3102Q9H379 93 aa25.26■■□□□ 1.63
HPS3-207ENST00000494327 CABYRO75952 493 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 MYL3P08590 195 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 CDC27P30260 824 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 CPT1AP50416 773 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 METAP2P50579 478 aaKnown RBP eCLIP25.25■■□□□ 1.63
HPS3-207ENST00000494327 IL31RAQ8NI17 732 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 GPKOWQ92917 476 aaPredicted RBP eCLIP25.25■■□□□ 1.63
HPS3-207ENST00000494327 PDLIM7Q9NR12 457 aa25.25■■□□□ 1.63
HPS3-207ENST00000494327 FAM217BQ9NTX9 383 aaPredicted RBP25.25■■□□□ 1.63
HPS3-207ENST00000494327 V9GY48 417 aaPredicted RBP25.25■■□□□ 1.63
HPS3-207ENST00000494327 CNTNAP5Q8WYK1 1306 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 DCDC2CA8MYV0 355 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 ARVCFO00192 962 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 CLTBP09497 229 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 ADD1P35611 737 aaKnown RBP25.24■■□□□ 1.63
HPS3-207ENST00000494327 BRDTQ58F21 947 aaPredicted RBP25.24■■□□□ 1.63
HPS3-207ENST00000494327 CCDC62Q6P9F0 684 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 RUFY3Q7L099 469 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 VSIG10LQ86VR7 867 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 UBE2OQ9C0C9 1292 aaKnown RBP25.24■■□□□ 1.63
HPS3-207ENST00000494327 PSTPIP2Q9H939 334 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 CYP46A1Q9Y6A2 500 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 MRVI1Q9Y6F6 885 aa25.24■■□□□ 1.63
HPS3-207ENST00000494327 TRIM43BA6NCK2 446 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 CCND2P30279 289 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms