RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 DTNBO60941 627 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 CFBP00751 764 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 TFRCP02786 760 aaKnown RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 GNAQP50148 359 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBA3-211ENST00000493957 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 ANAPC15P60006 121 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
UBA3-211ENST00000493957 RRP36Q96EU6 259 aaKnown RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 LZTS2Q9BRK4 669 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 DDX20Q9UHI6 824 aaKnown RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
UBA3-211ENST00000493957 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
UBA3-211ENST00000493957 HSD17B4P51659 736 aa13.48□□□□□ -0.25
UBA3-211ENST00000493957 EVCP57679 992 aa13.48□□□□□ -0.25
UBA3-211ENST00000493957 TMEM63BQ5T3F8 832 aa13.48□□□□□ -0.25
UBA3-211ENST00000493957 UBE2Q1Q7Z7E8 422 aa13.48□□□□□ -0.25
UBA3-211ENST00000493957 FBXO16Q8IX29 292 aaPredicted RBP13.48□□□□□ -0.25
UBA3-211ENST00000493957 MSL3Q8N5Y2 521 aaKnown RBP13.48□□□□□ -0.25
UBA3-211ENST00000493957 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
UBA3-211ENST00000493957 OGDHLQ9ULD0 1010 aa13.48□□□□□ -0.25
UBA3-211ENST00000493957 CEP290O15078 2479 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.47□□□□□ -0.25
UBA3-211ENST00000493957 SEPT4O43236 478 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 FARP2O94887 1054 aaPredicted RBP13.47□□□□□ -0.25
UBA3-211ENST00000493957 RCAN1P53805 252 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 AK2P54819 239 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 GHRHRQ02643 423 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 STK3Q13188 491 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 ACVR2BQ13705 512 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 WWC2Q6AWC2 1192 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
UBA3-211ENST00000493957 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 KIF2CQ99661 725 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
UBA3-211ENST00000493957 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
UBA3-211ENST00000493957 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
UBA3-211ENST00000493957 ASB14A6NK59 587 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 LARGE1O95461 756 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
UBA3-211ENST00000493957 NTRK3Q16288 839 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 CCDC144BQ3MJ40 725 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 MCF2L2Q86YR7 1114 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 IL31RAQ8NI17 732 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 PHKBQ93100 1093 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
UBA3-211ENST00000493957 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 PGK1P00558 417 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 EDNRBP24530 442 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 MLLT1Q03111 559 aaPredicted RBP13.45□□□□□ -0.26
UBA3-211ENST00000493957 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
UBA3-211ENST00000493957 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 PAWRQ96IZ0 340 aaKnown RBP13.45□□□□□ -0.26
UBA3-211ENST00000493957 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
UBA3-211ENST00000493957 C22orf23Q9BZE7 217 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
UBA3-211ENST00000493957 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
UBA3-211ENST00000493957 STXBP3O00186 592 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 MEIS2O14770 477 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 ADAMTS3O15072 1205 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 AKR1A1P14550 325 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 NEK4P51957 841 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 PKN1Q16512 942 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 UBE2SQ16763 222 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
UBA3-211ENST00000493957 RMDN3Q96TC7 470 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
UBA3-211ENST00000493957 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
UBA3-211ENST00000493957 MSCO60682 206 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
UBA3-211ENST00000493957 POLR2MP0CAP2 368 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 RARBP10826 455 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 SMPD1P17405 629 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
UBA3-211ENST00000493957 PDE4DQ08499 809 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 SCRN1Q12765 414 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 LRRC41Q15345 812 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms