RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ATP8B3O60423 1300 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 IQANK1A0A1B0GTG1 560 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PRR23D1E9PI22 279 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PRR23D2P0DMB1 279 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 DLATP10515 647 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MED21Q13503 144 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SEPT2Q15019 361 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TAGAPQ8N103 731 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 CFAP36Q96G28 342 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ZFYVE19Q96K21 471 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 CYTH2Q99418 400 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 NCOA5Q9HCD5 579 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 STRIP2Q9ULQ0 834 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ZBTB12Q9Y330 459 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 H0YC42 278 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 H7C1D1 291 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 KRT1P04264 644 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ADCY1Q08828 1119 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TFDP1Q14186 410 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MESDQ14696 234 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 C8orf34Q49A92 452 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 RSRC2Q7L4I2 434 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ZC3H18Q86VM9 953 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SLC17A8Q8NDX2 589 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 APPBP2Q92624 585 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 DYDC2Q96IM9 177 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SPATA17Q96L03 361 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 UIMC1Q96RL1 719 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 AS3MTQ9HBK9 375 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SUGT1Q9Y2Z0 365 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PCDHB4Q9Y5E5 795 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TMEM232C9JQI7 657 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 DCTN3O75935 186 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ANP32DO95626 131 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 HSPA4LO95757 839 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 STAT2P52630 851 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 EHHADHQ08426 723 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 DARS2Q6PI48 645 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PLEKHM3Q6ZWE6 761 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 KRT27Q7Z3Y8 459 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF280CQ8ND82 737 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 RABGGTAQ92696 567 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 SYTL2Q9HCH5 934 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGAP26Q9UNA1 814 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TMOD1P28289 359 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FSCBQ5H9T9 825 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SZRD1Q7Z422 152 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 TESPA1A2RU30 521 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PLS3P13797 630 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CPA1P15085 419 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PMLP29590 882 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 MAPK4P31152 587 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PDE6BP35913 854 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 EPHB1P54762 984 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SMCR8Q8TEV9 937 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SAAL1Q96ER3 474 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ANKRD36BP1Q96IX9 119 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PHACTR3Q96KR7 559 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 MMTAG2Q9BU76 263 aaKnown RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 TEKT3Q9BXF9 490 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CCDC90BQ9GZT6 254 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 KLC2Q9H0B6 622 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 RRAGDQ9NQL2 400 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 KCNJ14Q9UNX9 436 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGAP10A1A4S6 786 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SMCO2A6NFE2 343 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SERPINB10P48595 397 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SLC9A5Q14940 896 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CEP55Q53EZ4 464 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FAM160B1Q5W0V3 765 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 OTUD7BQ6GQQ9 843 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CYP4F22Q6NT55 531 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FRA10AC1Q70Z53 315 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CRLF3Q8IUI8 442 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FAM178BQ8IXR5 827 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 NDUFAF2Q8N183 169 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 SYT2Q8N9I0 419 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CHURC1Q8WUH1 139 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 STAMQ92783 540 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FAM96AQ9H5X1 160 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 NRBP2Q9NSY0 501 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ATP11BQ9Y2G3 1177 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 CHRNA2Q15822 529 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms