RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GBP1P32455 592 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 TUBP50607 506 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 ARPC4P59998 168 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 MYL5Q02045 173 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 POSTNQ15063 836 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 TTMPQ5BVD1 217 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 RAB11FIP4Q86YS3 637 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 USP33Q8TEY7 942 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 AIDAQ96BJ3 306 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 CCDC43Q96MW1 224 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 LUC7LQ9NQ29 371 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 JADE2Q9NQC1 790 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 LUC7L2Q9Y383 392 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 BCL9LQ86UU0 1499 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 MAP3K13O43283 966 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 SRGAP2O75044 1071 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 CCNI2Q6ZMN8 369 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 APLFQ8IW19 511 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 FNBP4Q8N3X1 1017 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 RNF10Q8N5U6 811 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 ATP6V0A1Q93050 837 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 USP28Q96RU2 1077 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 SYT15Q9BQS2 421 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 PCDH18Q9HCL0 1135 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 RASAL2Q9UJF2 1139 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 RNMTO43148 476 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 MMEP08473 750 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 VIMP08670 466 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 INHBCP55103 352 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 HDAC4P56524 1084 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 STK38Q15208 465 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 SIX5Q8N196 739 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 CCDC197Q8NCU1 140 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 PI4K2BQ8TCG2 481 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 MRPS27Q92552 414 aaKnown RBP7.54□□□□□ -1.2
VPS13B-205ENST00000493587 BRF1Q92994 677 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 CNKSR1Q969H4 720 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 KLHL29Q96CT2 875 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 DRC3Q9H069 523 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 IL25Q9H293 177 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 LEMD3Q9Y2U8 911 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 MYH13Q9UKX3 1938 aa7.54□□□□□ -1.2
VPS13B-205ENST00000493587 A0A0U1RQJ8 604 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 AKR1B15C9JRZ8 316 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 RAB11FIP3O75154 756 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SP100P23497 879 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 STIP1P31948 543 aaKnown RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 HOXD12P35452 270 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NEK2P51955 445 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 RAD23BP54727 409 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 CCDC6Q16204 474 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SPECC1LQ69YQ0 1117 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PEX5LQ8IYB4 626 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NME8Q8N427 588 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 DUSP9Q99956 384 aaKnown RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 POLR3CQ9BUI4 534 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NDEL1Q9GZM8 345 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PFDN4Q9NQP4 134 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 EXOC1Q9NV70 894 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 BTAF1O14981 1849 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 TRIM37O94972 964 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 C2orf54Q08AI8 447 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SEPT2Q15019 361 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SMUG1Q53HV7 270 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 CFAP157Q5JU67 520 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 ALS2CLQ60I27 953 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 ANO7Q6IWH7 933 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 POTEEQ6S8J3 1075 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SLC4A10Q6U841 1118 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 KDM7AQ6ZMT4 941 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 KLHDC4Q8TBB5 520 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 IFT81Q8WYA0 676 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 MMS19Q96T76 1030 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SH3GL1Q99961 368 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 TUBA8Q9NY65 449 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PLAAQ9Y263 795 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SAR1BQ9Y6B6 198 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NRXN2Q9P2S2 1712 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 CFAP73A6NFT4 308 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PHF20L1A8MW92 1017 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 OXCT1P55809 520 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NLRP12P59046 1061 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PSMC1P62191 440 aaKnown RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 PAK2Q13177 524 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 KIF2BQ8N4N8 673 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 MORC4Q8TE76 937 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms