RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 PDGFDQ9GZP0 370 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-212ENST00000493551 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-212ENST00000493551 BIN2Q9UBW5 565 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-212ENST00000493551 ARHGEF10O15013 1369 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 TECPR2O15040 1411 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 ADGRB2O60241 1585 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 MAPK1P28482 360 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 ATP2B2Q01814 1243 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 CCDC85BQ15834 202 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-212ENST00000493551 UBXN11Q5T124 520 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 VWCEQ96DN2 955 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 SPON1Q9HCB6 807 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 POGKQ9P215 609 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 KLHL14Q9P2G3 628 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 SRRDQ9UH36 339 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 PCDHA5Q9Y5H7 936 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 YTHDC2Q9H6S0 1430 aaKnown RBP6.38□□□□□ -1.39
CLIP4-212ENST00000493551 NRXN1Q9ULB1 1477 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 NUP188Q5SRE5 1749 aa6.38□□□□□ -1.39
CLIP4-212ENST00000493551 COL14A1Q05707 1796 aaKnown RBP6.37□□□□□ -1.39
CLIP4-212ENST00000493551 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 PRAG1Q86YV5 1406 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 SBNO1A3KN83 1393 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 KIAA0232Q92628 1395 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 UPK3BL1B0FP48 263 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 UPK3BL2E5RIL1 263 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 FFAR3O14843 346 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 KCNQ2O43526 872 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 BUB1BO60566 1050 aaPredicted RBP6.37□□□□□ -1.39
CLIP4-212ENST00000493551 ARL4AP40617 200 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 MAGEA10P43363 369 aaPredicted RBP6.37□□□□□ -1.39
CLIP4-212ENST00000493551 SLURP1P55000 103 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 EVA1CP58658 441 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 FMR1Q06787 632 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLIP4-212ENST00000493551 KRTAP1-1Q07627 177 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 NBPF8Q3BBV2 869 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 FAM196AQ6ZSG2 479 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 SLFN12Q8IYM2 578 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 NLGN1Q8N2Q7 840 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 SYTL5Q8TDW5 730 aaPredicted RBP6.37□□□□□ -1.39
CLIP4-212ENST00000493551 HHIPL1Q96JK4 782 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 PLCD4Q9BRC7 762 aa6.37□□□□□ -1.39
CLIP4-212ENST00000493551 NRKQ7Z2Y5 1582 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 DISP2A7MBM2 1401 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 GPRASP1Q5JY77 1395 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 ABCC11Q96J66 1382 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 SPATA31A1Q5TZJ5 1347 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 PLCG1P19174 1290 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 NMIQ13287 307 aaPredicted RBP6.36□□□□□ -1.39
CLIP4-212ENST00000493551 TMEM201Q5SNT2 666 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 USHBP1Q8N6Y0 703 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 NGDNQ8NEJ9 315 aaKnown RBP6.36□□□□□ -1.39
CLIP4-212ENST00000493551 HDAC8Q9BY41 377 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 FOXP3Q9BZS1 431 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 CORINQ9Y5Q5 1042 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 KNDC1Q76NI1 1749 aa6.36□□□□□ -1.39
CLIP4-212ENST00000493551 SSU72P8A0A1W2PR75 194 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 LIG3P49916 1009 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 PCBP3P57721 371 aaKnown RBP6.35□□□□□ -1.39
CLIP4-212ENST00000493551 RTP1P59025 263 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 LAPTM5Q13571 262 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 RAB3GAP1Q15042 981 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 DIEXFQ68CQ4 756 aaKnown RBP6.35□□□□□ -1.39
CLIP4-212ENST00000493551 GALNT18Q6P9A2 607 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 DAGLBQ8NCG7 672 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 TCFL5Q9UL49 500 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 WWC3Q9ULE0 1092 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 TRPM3Q9HCF6 1732 aaPredicted RBP6.35□□□□□ -1.39
CLIP4-212ENST00000493551 RREB1Q92766 1687 aa6.35□□□□□ -1.39
CLIP4-212ENST00000493551 PIK3C2GO75747 1445 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 MYOM1P52179 1685 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 TMEM82A0PJX8 343 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 CCDC74BQ96LY2 380 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 TAF6LQ9Y6J9 622 aa6.34□□□□□ -1.39
CLIP4-212ENST00000493551 DHX57Q6P158 1386 aaKnown RBP6.33□□□□□ -1.4
CLIP4-212ENST00000493551 NINLQ9Y2I6 1382 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 ALS2Q96Q42 1657 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 OVOL3O00110 214 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 MATN3O15232 486 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 GRIN3BO60391 1043 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 C1QTNF8P60827 252 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 ADAM17P78536 824 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 ZNF655Q8N720 491 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-212ENST00000493551 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 TCTN2Q96GX1 697 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 SPATA31E1Q6ZUB1 1445 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 SSH2Q76I76 1423 aa6.33□□□□□ -1.4
CLIP4-212ENST00000493551 ANKRD30BQ9BXX2 1392 aa6.32□□□□□ -1.4
CLIP4-212ENST00000493551 WTIPA6NIX2 430 aaPredicted RBP6.32□□□□□ -1.4
CLIP4-212ENST00000493551 PFKLP17858 780 aa6.32□□□□□ -1.4
CLIP4-212ENST00000493551 TFE3P19532 575 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms