RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 DNAJB2P25686 324 aa25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 PSRC1Q6PGN9 363 aaPredicted RBP25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 TAAR1Q96RJ0 339 aa25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 IL23AQ9NPF7 189 aa25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 MRPL11Q9Y3B7 192 aaKnown RBP25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 SCN10AQ9Y5Y9 1956 aa25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 UNC80Q8N2C7 3258 aa25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 ARIH2O95376 493 aa25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 TXNP10599 105 aaKnown RBP25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 MCF2L2Q86YR7 1114 aa25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 MYLIPQ8WY64 445 aa25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 MTG1Q9BT17 334 aaPredicted RBP25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 U3KPZ7 1027 aaPredicted RBP25.83■■□□□ 1.73
LYSMD4-208ENST00000493256 A6NJR5 290 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 KLRF2D3W0D1 207 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 CCL23P55773 120 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 TRDNQ13061 729 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 TTLL4Q14679 1199 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 BRDTQ58F21 947 aaPredicted RBP25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 NSUN6Q8TEA1 469 aaKnown RBP25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 WNT8AQ9H1J5 351 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 GPHNQ9NQX3 736 aaPredicted RBP25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 MAD2L2Q9UI95 211 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 TAF6LQ9Y6J9 622 aa25.82■■□□□ 1.72
LYSMD4-208ENST00000493256 DLL1O00548 723 aa25.81■■□□□ 1.72
LYSMD4-208ENST00000493256 CCDC62Q6P9F0 684 aa25.81■■□□□ 1.72
LYSMD4-208ENST00000493256 RMDN3Q96TC7 470 aa25.81■■□□□ 1.72
LYSMD4-208ENST00000493256 TRMT13Q9NUP7 481 aaKnown RBP25.81■■□□□ 1.72
LYSMD4-208ENST00000493256 EYSQ5T1H1 3165 aa25.81■■□□□ 1.72
LYSMD4-208ENST00000493256 GRXCR1A8MXD5 290 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 OPLAHO14841 1288 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 SGSM2O43147 1006 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 PPP1R11O60927 126 aaPredicted RBP25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 HERVK_113Q902F9 699 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 MTMR8Q96EF0 704 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 AMNQ9BXJ7 453 aa25.8■■□□□ 1.72
LYSMD4-208ENST00000493256 KIAA1217Q5T5P2 1943 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 PALM3A6NDB9 673 aaPredicted RBP25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 CYP2C9P11712 490 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 SLC35G1Q2M3R5 365 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 NBPF20Q3BBV1 942 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 SEPT14Q6ZU15 432 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 PPP1R13LQ8WUF5 828 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 TIFAQ96CG3 184 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 IWS1Q96ST2 819 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 SENP2Q9HC62 589 aa25.79■■□□□ 1.72
LYSMD4-208ENST00000493256 E7EWF7 191 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 IFIT3O14879 490 aaKnown RBP25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 KPNA6O60684 536 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 CFBP00751 764 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 SUPT20HL2P0C7V6 817 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 EIF2AK2P19525 551 aaKnown RBP25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 PBX2P40425 430 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 GRM4Q14833 912 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 STXBP2Q15833 593 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 FAM47CQ5HY64 1035 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 ARHGEF16Q5VV41 709 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 STOX1Q6ZVD7 989 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 MAFAQ8NHW3 353 aaPredicted RBP25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 PBX4Q9BYU1 374 aa25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 CXXC1Q9P0U4 656 aaPredicted RBP25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 BAZ2BQ9UIF8 2168 aaKnown RBP25.78■■□□□ 1.72
LYSMD4-208ENST00000493256 ZBTB5O15062 677 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 FGBP02675 491 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 FOSL2P15408 326 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 HSD17B4P51659 736 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 GHRHRQ02643 423 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 GRIN2CQ14957 1233 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 RALYLQ86SE5 291 aaKnown RBP25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 VWCEQ96DN2 955 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 SCLYQ96I15 445 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 PXMP2Q9NR77 195 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 CHD9Q3L8U1 2897 aa25.77■■□□□ 1.72
LYSMD4-208ENST00000493256 ARHGAP1Q07960 439 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 NFRKBQ6P4R8 1299 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 CHST3Q7LGC8 479 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 OTOP2Q7RTS6 562 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 NCOA7Q8NI08 942 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 AFG1LQ8WV93 481 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 ZNF576Q9H609 170 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 PCDHA1Q9Y5I3 950 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 PRUNE2Q8WUY3 3088 aa25.76■■□□□ 1.71
LYSMD4-208ENST00000493256 ERICH2A1L162 156 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 GH1P01241 217 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 NR3C2P08235 984 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 WTAPQ15007 396 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 HOMER1Q86YM7 354 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 MAP4K1Q92918 833 aa25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 MTIF3Q9H2K0 278 aaKnown RBP25.75■■□□□ 1.71
LYSMD4-208ENST00000493256 MMP3P08254 477 aa25.74■■□□□ 1.71
LYSMD4-208ENST00000493256 ANTXR2P58335 489 aa25.74■■□□□ 1.71
LYSMD4-208ENST00000493256 RPUSD2Q8IZ73 545 aaKnown RBP25.74■■□□□ 1.71
LYSMD4-208ENST00000493256 PIGSQ96S52 555 aa25.74■■□□□ 1.71
LYSMD4-208ENST00000493256 RIOX1Q9H6W3 641 aa25.74■■□□□ 1.71
LYSMD4-208ENST00000493256 MYO9BQ13459 2157 aa25.73■■□□□ 1.71
LYSMD4-208ENST00000493256 CYTH3O43739 400 aa25.73■■□□□ 1.71
LYSMD4-208ENST00000493256 EIF3JO75822 258 aaKnown RBP25.73■■□□□ 1.71
LYSMD4-208ENST00000493256 PTPN11Q06124 597 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms