RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 KRT79Q5XKE5 535 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 KIAA0825Q8IV33 1275 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 SNX29Q8TEQ0 813 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 CDK5RAP3Q96JB5 506 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 SLC39A2Q9NP94 309 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 DDX25Q9UHL0 483 aaKnown RBP21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 PCDHAC2Q9Y5I4 1007 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 EPN1Q9Y6I3 576 aaPredicted RBP21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 CACNB3P54284 484 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 MIIPQ5JXC2 388 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 WDR59Q6PJI9 974 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 RAD54LQ92698 747 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 SLF1Q9BQI6 1058 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 IDI2Q9BXS1 227 aa21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
TSC22D4-205ENST00000493217 DDTLA6NHG4 134 aaPredicted RBP21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 RASSF10A6NK89 507 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 NDUFA10O95299 355 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 HDLBPQ00341 1268 aaKnown RBP21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 TBC1D8BQ0IIM8 1120 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 DACT2Q5SW24 774 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 RETREG2Q8NC44 543 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 MYO1AQ9UBC5 1043 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 PI4KBQ9UBF8 816 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 FAM198AQ9UFP1 575 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 SIPA1L1O43166 1804 aa21.08■□□□□ 0.97
TSC22D4-205ENST00000493217 EEF2P13639 858 aaKnown RBP21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 GCFC2P16383 781 aaKnown RBP21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 TCP10Q12799 353 aa21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 KCNK18Q7Z418 384 aa21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 GPR161Q8N6U8 529 aaKnown RBP21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 NUP58Q9BVL2 599 aa21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 ARGLU1Q9NWB6 273 aaPredicted RBP21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 NYAP2Q9P242 653 aa21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 REXO2Q9Y3B8 237 aaKnown RBP21.08■□□□□ 0.96
TSC22D4-205ENST00000493217 MYH7BA7E2Y1 1941 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 EHHADHQ08426 723 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 MEA1Q16626 185 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 CERKLQ49MI3 558 aaPredicted RBP21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 SH3BP5LQ7L8J4 393 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 DYMQ7RTS9 669 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 KANSL2Q9H9L4 492 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 PRDM10Q9NQV6 1147 aa21.07■□□□□ 0.96
TSC22D4-205ENST00000493217 NKRFO15226 690 aaKnown RBP eCLIP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 APBA3O96018 575 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 MTIF2P46199 727 aaKnown RBP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 TUBB2AQ13885 445 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 ECM1Q16610 540 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 SHROOM1Q2M3G4 852 aaPredicted RBP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 KRT222Q8N1A0 295 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 SLC35F6Q8N357 371 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 GUF1Q8N442 669 aaKnown RBP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 TUBB2BQ9BVA1 445 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 NOC4LQ9BVI4 516 aaKnown RBP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 AGPAT5Q9NUQ2 364 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 CDC23Q9UJX2 597 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 CTAGE9A4FU28 777 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 SLC1A4P43007 532 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 TSR1Q2NL82 804 aaKnown RBP21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 QRICH1Q2TAL8 776 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 TATDN1Q6P1N9 297 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 SIAH1Q8IUQ4 282 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 DCAF4Q8WV16 495 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 DDX12PQ92771 950 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 ERGIC2Q96RQ1 377 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 LRRC27Q9C0I9 530 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 GLT8D2Q9H1C3 349 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 PCDHA12Q9UN75 941 aa21.06■□□□□ 0.96
TSC22D4-205ENST00000493217 SCN9AQ15858 1988 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 NPM3O75607 178 aaKnown RBP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 ZRANB2O95218 330 aaKnown RBP eCLIP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 TRIM21P19474 475 aaKnown RBP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 BMS1Q14692 1282 aaKnown RBP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 RABGGTAQ92696 567 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 EPC1Q9H2F5 836 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 FHOD1Q9Y613 1164 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L15C9J2P7 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L13C9JLJ4 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L11C9JVI0 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L18D6R9N7 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L22D6RA61 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L17D6RBQ6 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L19D6RCP7 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L20D6RJB6 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 ECE2O60344 883 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 HOXA7P31268 230 aaPredicted RBP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 KLK7P49862 253 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L24Q0WX57 530 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 FIGNQ5HY92 759 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 HYIQ5T013 277 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 SLFN13Q68D06 897 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 USP17L6PQ6QN14 398 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 GJA10Q969M2 543 aa21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 NAP1L4Q99733 375 aaKnown RBP21.05■□□□□ 0.96
TSC22D4-205ENST00000493217 PCDHA1Q9Y5I3 950 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms