RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 FAM170BA6NMN3 283 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
TPR-208ENST00000492973 DDX58O95786 925 aaKnown RBP8.64□□□□□ -1.03
TPR-208ENST00000492973 GPTP24298 496 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 POLD1P28340 1107 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
TPR-208ENST00000492973 FBXL19Q6PCT2 694 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 GOLM1Q8NBJ4 401 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 GIMAP7Q8NHV1 300 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 ZNF507Q8TCN5 953 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 SSU72Q9NP77 194 aaKnown RBP8.64□□□□□ -1.03
TPR-208ENST00000492973 NIP7Q9Y221 180 aaKnown RBP eCLIP8.64□□□□□ -1.03
TPR-208ENST00000492973 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 MAP3K2Q9Y2U5 619 aa8.64□□□□□ -1.03
TPR-208ENST00000492973 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 GREM1O60565 184 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 SERPINB2P05120 415 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 IGKV5-2P06315 115 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 EIF4A3P38919 411 aaKnown RBP8.63□□□□□ -1.03
TPR-208ENST00000492973 HSP90AB3PQ58FF7 597 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 SNAP47Q5SQN1 464 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 SUSD4Q5VX71 490 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 OGFOD3Q6PK18 319 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 NLRP10Q86W26 655 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.63□□□□□ -1.03
TPR-208ENST00000492973 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 MYD88Q99836 296 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
TPR-208ENST00000492973 FBRSQ9HAH7 460 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 ADAMTS1Q9UHI8 967 aa8.63□□□□□ -1.03
TPR-208ENST00000492973 NOB1Q9ULX3 412 aaKnown RBP8.63□□□□□ -1.03
TPR-208ENST00000492973 CARMIL3Q8ND23 1372 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 PTPRCP08575 1304 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 NTSR2O95665 410 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 GRK4P32298 578 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 CAP2P40123 477 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 PARP10Q53GL7 1025 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 C20orf194Q5TEA3 1177 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 PRR5LQ6MZQ0 368 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 ZNF765Q7L2R6 523 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 OSBPL1AQ9BXW6 950 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 PIM2Q9P1W9 311 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 TNNQ9UQP3 1299 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
TPR-208ENST00000492973 ETF1P62495 437 aaKnown RBP8.61□□□□□ -1.03
TPR-208ENST00000492973 CYP27A1Q02318 531 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 MPP2Q14168 576 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
TPR-208ENST00000492973 NKG7Q16617 165 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 BEND3Q5T5X7 828 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 ERICH6BQ5W0A0 696 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 CDC37L1Q7L3B6 337 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 METTL16Q86W50 562 aaKnown RBP8.61□□□□□ -1.03
TPR-208ENST00000492973 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
TPR-208ENST00000492973 SYNE4Q8N205 404 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 FRAT1Q92837 279 aaPredicted RBP8.61□□□□□ -1.03
TPR-208ENST00000492973 RNF34Q969K3 372 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
TPR-208ENST00000492973 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 KIF16BQ96L93 1317 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 IPO8O15397 1037 aaKnown RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 BPNT1O95861 308 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 FAM87AP0C7U9 286 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 CD97P48960 835 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 ZKSCAN2Q63HK3 967 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 ARMCX6Q7L4S7 300 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 HID1Q8IV36 788 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 CNBD1Q8NA66 436 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 CCDC191Q8NCU4 936 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 FBXO27Q8NI29 283 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 UTP14AQ9BVJ6 771 aaKnown RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 API5Q9BZZ5 524 aaKnown RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 LEMD3Q9Y2U8 911 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 ABCC12Q96J65 1359 aa8.6□□□□□ -1.03
TPR-208ENST00000492973 IBTKQ9P2D0 1353 aaPredicted RBP8.6□□□□□ -1.03
TPR-208ENST00000492973 LEFTY1O75610 366 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 LRIG2O94898 1065 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 TRIM27P14373 513 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 FOSL1P15407 271 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 NEXNQ0ZGT2 675 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 LRP8Q14114 963 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 GCKRQ14397 625 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 ZNF394Q53GI3 561 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 SLC10A5Q5PT55 438 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 SLC4A10Q6U841 1118 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 ATF7IPQ6VMQ6 1270 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 REC114Q7Z4M0 266 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 USP48Q86UV5 1035 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
TPR-208ENST00000492973 EXOC6Q8TAG9 804 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms