RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 EVCP57679 992 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 NKX3-2P78367 333 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 ARHGEF16Q5VV41 709 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 TEX2Q8IWB9 1127 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 KLHDC9Q8NEP7 349 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 GNEQ9Y223 722 aaKnown RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 Q9Y3F1 56 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 PIK3CDO00329 1044 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 NKRFO15226 690 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 SMPD1P17405 629 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 CDC27P30260 824 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 HOXA13P31271 388 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 FUT2Q10981 343 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 STXBP2Q15833 593 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 TLK2Q86UE8 772 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 CCDC82Q8N4S0 544 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 PCSK9Q8NBP7 692 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 CUL5Q93034 780 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 FRMPD4Q14CM0 1322 aa12.29□□□□□ -0.44
CDC42SE1-206ENST00000492796 EIF2AK2P19525 551 aaKnown RBP12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 SNX17Q15036 470 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 C1orf53Q5VUE5 145 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 CCSAPQ6IQ19 270 aaPredicted RBP12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 PDCD2LQ9BRP1 358 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 AP5M1Q9H0R1 490 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 PDRG1Q9NUG6 133 aa12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 MKI67P46013 3256 aaKnown RBP12.28□□□□□ -0.44
CDC42SE1-206ENST00000492796 A0A1W2PQ45 241 aaPredicted RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 A0A1W2PQY0 241 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 hCG_1642624A0A1W2PR95 340 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 ZEB2O60315 1214 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 EIF3JO75822 258 aaKnown RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 NR3C2P08235 984 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 PDIA3P30101 505 aaKnown RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 CCND2P30279 289 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 ACLYP53396 1101 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 PGM5Q15124 567 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 KCNA10Q16322 511 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 LRRC26Q2I0M4 334 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 C8orf34Q49A92 452 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 SLC39A5Q6ZMH5 540 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 SMARCC2Q8TAQ2 1214 aa12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 ALDH8A1Q9H2A2 487 aaPredicted RBP12.27□□□□□ -0.45
CDC42SE1-206ENST00000492796 MEIS2O14770 477 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 CTAGE5O15320 804 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 STAM2O75886 525 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 TXNP10599 105 aaKnown RBP12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 CPT1AP50416 773 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 NAPAP54920 295 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 ANKRD1Q15327 319 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 FSCN1Q16658 493 aaKnown RBP12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 GNASQ5JWF2 1037 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 VSIG10LQ86VR7 867 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 FCHSD1Q86WN1 690 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.455e-8■■□□□ 14
CDC42SE1-206ENST00000492796 GLT1D1Q96MS3 346 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 GLT8D2Q9H1C3 349 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 STARD7Q9NQZ5 370 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 ELP1O95163 1332 aa12.26□□□□□ -0.45
CDC42SE1-206ENST00000492796 H0YGN5 161 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 DYNC1LI2O43237 492 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 CABYRO75952 493 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 SEC24BO95487 1268 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 ASGR1P07306 291 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms