RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CALML3P27482 149 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 SLC16A2P36021 539 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 KCNJ6P48051 423 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 TAP1Q03518 808 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 DNERQ8NFT8 737 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 ARNTL2Q8WYA1 636 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 HCN4Q9Y3Q4 1203 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
SND1-215ENST00000492772 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 FGRP09769 529 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 CLEC4DQ8WXI8 215 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 HLA-CQ95604 372 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
SND1-215ENST00000492772 FRMPD2Q68DX3 1309 aaPredicted RBP12.95□□□□□ -0.34
SND1-215ENST00000492772 TLL1O43897 1013 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
SND1-215ENST00000492772 MX1P20591 662 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 RPS6P62753 249 aaKnown RBP12.95□□□□□ -0.34
SND1-215ENST00000492772 GRB10Q13322 594 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 TMEM47Q9BQJ4 181 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
SND1-215ENST00000492772 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 PARNO95453 639 aaKnown RBP12.94□□□□□ -0.34
SND1-215ENST00000492772 PDHBP11177 359 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 WDR5P61964 334 aaKnown RBP12.94□□□□□ -0.34
SND1-215ENST00000492772 ALX1Q15699 326 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 PTGISQ16647 500 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 KRT40Q6A162 431 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 SESTD1Q86VW0 696 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 MAF1Q9H063 256 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 SIP14410 1827 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
SND1-215ENST00000492772 TRIP12Q14669 1992 aaPredicted RBP12.93□□□□□ -0.34
SND1-215ENST00000492772 SELPP16109 830 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
SND1-215ENST00000492772 RBL2Q08999 1139 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 ZNF543Q08ER8 600 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
SND1-215ENST00000492772 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 RGS22Q8NE09 1264 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
SND1-215ENST00000492772 COPS5Q92905 334 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
SND1-215ENST00000492772 LPXNO60711 386 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 EFCAB14O75071 495 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 ARIH2O95376 493 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 GH1P01241 217 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 MMP3P08254 477 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
SND1-215ENST00000492772 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
SND1-215ENST00000492772 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 TTC14Q96N46 770 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 EPHX3Q9H6B9 360 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
SND1-215ENST00000492772 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 CXCL10P02778 98 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 USH1GQ495M9 461 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 GDF6Q6KF10 455 aaPredicted RBP12.91□□□□□ -0.34
SND1-215ENST00000492772 CCDC62Q6P9F0 684 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 TICAM2Q86XR7 235 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 AFG1LQ8WV93 481 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
SND1-215ENST00000492772 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
SND1-215ENST00000492772 ABCB11O95342 1321 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 MYH6P13533 1939 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 GPR37L1O60883 481 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 GJB5O95377 273 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 FGAP02671 866 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
SND1-215ENST00000492772 DEFB103AP81534 67 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 DGKDQ16760 1214 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
SND1-215ENST00000492772 SPRED2Q7Z698 418 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
SND1-215ENST00000492772 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
SND1-215ENST00000492772 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
SND1-215ENST00000492772 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 RAD9AQ99638 391 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms