RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SNW1Q13573 536 aaKnown RBP4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 RAB33AQ14088 237 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 TBC1D10BQ4KMP7 808 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 HLA-DQA1Q5Y7H0 255 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 B3GNT8Q7Z7M8 397 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 PPFIBP1Q86W92 1011 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 LGI4Q8N135 537 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 KLHL6Q8WZ60 621 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 ALG3Q92685 438 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 HIRIP3Q9BW71 556 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 MSRB2Q9Y3D2 182 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 TSC22D4Q9Y3Q8 395 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 SMARCA5O60264 1052 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 MVKQ03426 396 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 TNNI3KQ59H18 835 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 NBPF6Q5VWK0 638 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 MRM1Q6IN84 353 aaKnown RBP4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 DPH6Q7L8W6 267 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZNF761Q86XN6 746 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 Q8N1X5 172 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 PMFBP1Q8TBY8 1022 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 NBPF4Q96M43 638 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 PIF1Q9H611 641 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 PDLIM7Q9NR12 457 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 AP5S1Q9NUS5 200 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 ACTR10Q9NZ32 417 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 ST6GALNAC2Q9UJ37 374 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 PCDHB10Q9UN67 800 aa4.52□□□□□ -1.69
HMGB1P30-201ENST00000492455 C9IYK1 514 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 CLEC3AO75596 197 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 ASGR2P07307 311 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 VAV1P15498 845 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 CCNFP41002 786 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 MC3RP41968 323 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 DLX2Q07687 328 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 RASA3Q14644 834 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 PPP2R5EQ16537 467 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 DDR2Q16832 855 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 CKAP2LQ8IYA6 745 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 ADAMTS17Q8TE56 1095 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 SLC6A18Q96N87 628 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 FBXL21Q9UKT6 434 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZNF214Q9UL59 606 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 PCDHB12Q9Y5F1 795 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 HCFC2Q9Y5Z7 792 aa4.51□□□□□ -1.69
HMGB1P30-201ENST00000492455 LOC105371045A0A1W2PR82 267 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 SHOXO15266 292 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 GJB6O95452 261 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 PMS1P54277 932 aaKnown RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 CCDC144BQ3MJ40 725 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 CWF19L1Q69YN2 538 aaKnown RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 C6orf15Q6UXA7 325 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 CYP2R1Q6VVX0 501 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 CABP7Q86V35 215 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZNF512BQ96KM6 892 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 DSCC1Q9BVC3 393 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 MKRN2Q9H000 416 aaKnown RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 OSBPL2Q9H1P3 480 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 ST7Q9NRC1 585 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 GFOD1Q9NXC2 390 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 SUCOQ9UBS9 1254 aaKnown RBP4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 MINPP1Q9UNW1 487 aa4.5□□□□□ -1.69
HMGB1P30-201ENST00000492455 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 CBFA2T2O43439 604 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 GSNP06396 782 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 GSTM1P09488 218 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 SURF1Q15526 300 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 RGL3Q3MIN7 710 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 AXDND1Q5T1B0 1012 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 TDRD10Q5VZ19 366 aaKnown RBP4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 LARP1BQ659C4 914 aaKnown RBP4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 CRTC3Q6UUV7 619 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZNF513Q8N8E2 541 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 SMARCC2Q8TAQ2 1214 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 ZNF747Q9BV97 191 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 NUDT5Q9UKK9 219 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 INVSQ9Y283 1065 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 HS3ST3A1Q9Y663 406 aa4.49□□□□□ -1.69
HMGB1P30-201ENST00000492455 AMHP03971 560 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 CORO7P57737 925 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 VHLLQ6RSH7 139 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 FAM178BQ8IXR5 827 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 MKL1Q969V6 931 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 KLC2Q9H0B6 622 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 PHAXQ9H814 394 aaKnown RBP4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 SNTG2Q9NY99 539 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 SIRPGQ9P1W8 387 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 PLA2G2DQ9UNK4 145 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 SLC12A7Q9Y666 1083 aa4.48□□□□□ -1.69
HMGB1P30-201ENST00000492455 TACR1P25103 407 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 PMLP29590 882 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 CTSKP43235 329 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 TGFB2P61812 414 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 BMS1Q14692 1282 aaKnown RBP4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 FXNQ16595 210 aa4.47□□□□□ -1.69
HMGB1P30-201ENST00000492455 FAM26FQ5R3K3 315 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms