RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 DSCC1Q9BVC3 393 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 WNT8AQ9H1J5 351 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
HDAC3-212ENST00000492407 CXXC1Q9P0U4 656 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-212ENST00000492407 MTMR7Q9Y216 660 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 SLC4A7Q9Y6M7 1214 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 GRXCR1A8MXD5 290 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PARNO95453 639 aaKnown RBP10.68□□□□□ -0.7
HDAC3-212ENST00000492407 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PBX2P40425 430 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 CCL23P55773 120 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 HAND2P61296 217 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PSMC6P62333 389 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 TRAF1Q13077 416 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 BFSP2Q13515 415 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 ASPRV1Q53RT3 343 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 RASGRP2Q7LDG7 609 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 TBC1D10CQ8IV04 446 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PLEKHM2Q8IWE5 1019 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 PURBQ96QR8 312 aaKnown RBP10.68□□□□□ -0.7
HDAC3-212ENST00000492407 KRT23Q9C075 422 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 KAT14Q9H8E8 782 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 CNNM2Q9H8M5 875 aa10.68□□□□□ -0.7
HDAC3-212ENST00000492407 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 MYL3P08590 195 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 POU3F3P20264 500 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 GHRHRQ02643 423 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 TMEM63BQ5T3F8 832 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 OTOP2Q7RTS6 562 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 DHX37Q8IY37 1157 aaKnown RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 PRDM12Q9H4Q4 367 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 DIAPH3Q9NSV4 1193 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 DDX49Q9Y6V7 483 aaKnown RBP10.67□□□□□ -0.7
HDAC3-212ENST00000492407 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
HDAC3-212ENST00000492407 KDM4AO75164 1064 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 EIF3JO75822 258 aaKnown RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 BAIAP3O94812 1187 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 GH1P01241 217 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 ATP2A2P16615 1042 aaKnown RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 CASTP20810 708 aaKnown RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 STXBP2Q15833 593 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 KCNV1Q6PIU1 500 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 ADGRF4Q8IZF3 695 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 CAGE1Q8TC20 777 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 SYTL5Q8TDW5 730 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 UBA5Q9GZZ9 404 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-212ENST00000492407 PRDM6Q9NQX0 595 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
HDAC3-212ENST00000492407 CDH23Q9H251 3354 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 NEDD4P46934 1319 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 PARP1P09874 1014 aaKnown RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 GOLGA8HP0CJ92 632 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 CYP2C9P11712 490 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 PTGS1P23219 599 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 RBL2Q08999 1139 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 ADGRE1Q14246 886 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 USH1GQ495M9 461 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 CWC27Q6UX04 472 aaKnown RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 FBXO11Q86XK2 927 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 ENAHQ8N8S7 591 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 USP38Q8NB14 1042 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 SCLYQ96I15 445 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 RMDN3Q96TC7 470 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 UBAC1Q9BSL1 405 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 NKX2-4Q9H2Z4 354 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 THEGQ9P2T0 379 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 NOD1Q9Y239 953 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 YBX2Q9Y2T7 364 aaKnown RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
HDAC3-212ENST00000492407 SPTBN5Q9NRC6 3674 aaKnown RBP10.65□□□□□ -0.7
HDAC3-212ENST00000492407 MCM3APO60318 1980 aa10.65□□□□□ -0.71
HDAC3-212ENST00000492407 EYSQ5T1H1 3165 aa10.64□□□□□ -0.71
HDAC3-212ENST00000492407 ZBBXA8MT70 800 aa10.64□□□□□ -0.71
HDAC3-212ENST00000492407 KIF28PB7ZC32 967 aa10.64□□□□□ -0.71
HDAC3-212ENST00000492407 TNFRSF10AO00220 468 aa10.64□□□□□ -0.71
HDAC3-212ENST00000492407 HSD17B4P51659 736 aa10.64□□□□□ -0.71
HDAC3-212ENST00000492407 ARHGAP1Q07960 439 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms