RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CYTH3O43739 400 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 EIF2AK2P19525 551 aaKnown RBP17.41■□□□□ 0.38
TOM1-215ENST00000491987 MCM5P33992 734 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 PSMC6P62333 389 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 SHHQ15465 462 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 ARHGEF16Q5VV41 709 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 FAM126BQ8IXS8 530 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 COPS5Q92905 334 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 TBX21Q9UL17 535 aa17.41■□□□□ 0.38
TOM1-215ENST00000491987 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
TOM1-215ENST00000491987 NKRFO15226 690 aaKnown RBP eCLIP17.4■□□□□ 0.38
TOM1-215ENST00000491987 CDC45O75419 566 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 DDAH1O94760 285 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 ARIH2O95376 493 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 MYL3P08590 195 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 TXNP10599 105 aaKnown RBP17.4■□□□□ 0.38
TOM1-215ENST00000491987 CPT1AP50416 773 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 HSD17B4P51659 736 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 ITGA7Q13683 1181 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 TTLL4Q14679 1199 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
TOM1-215ENST00000491987 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
TOM1-215ENST00000491987 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 EPHB4P54760 987 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 GHRHRQ02643 423 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 FPGSQ05932 587 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 STXBP2Q15833 593 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 IWS1Q96ST2 819 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 PPP1R12CQ9BZL4 782 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 PXMP2Q9NR77 195 aa17.39■□□□□ 0.37
TOM1-215ENST00000491987 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 TIMP1P01033 207 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 CD4P01730 458 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 RXRAP19793 462 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
TOM1-215ENST00000491987 PURAQ00577 322 aaKnown RBP17.38■□□□□ 0.37
TOM1-215ENST00000491987 TRAF1Q13077 416 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 GPR153Q6NV75 609 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 CCDC62Q6P9F0 684 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 Q7L0L9 218 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
TOM1-215ENST00000491987 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 NR3C2P08235 984 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 KIF5BP33176 963 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
TOM1-215ENST00000491987 RAB11FIP4Q86YS3 637 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 TMTC2Q8N394 836 aa17.37■□□□□ 0.37
TOM1-215ENST00000491987 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
TOM1-215ENST00000491987 MAP3K20Q9NYL2 800 aaKnown RBP17.37■□□□□ 0.37
TOM1-215ENST00000491987 A6NJR5 290 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 GCOM1H8Y6P7 765 aaPredicted RBP17.36■□□□□ 0.37
TOM1-215ENST00000491987 EIF3JO75822 258 aaKnown RBP17.36■□□□□ 0.37
TOM1-215ENST00000491987 POLR2MP0CAP2 368 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 MYCLP12524 364 aaPredicted RBP17.36■□□□□ 0.37
TOM1-215ENST00000491987 LIFRP42702 1097 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
TOM1-215ENST00000491987 RNPC3Q96LT9 517 aaKnown RBP17.36■□□□□ 0.37
TOM1-215ENST00000491987 PDCD2LQ9BRP1 358 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 TRPV6Q9H1D0 765 aa17.36■□□□□ 0.37
TOM1-215ENST00000491987 B4GALT4O60513 344 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 GH1P01241 217 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 CYP2C18P33260 490 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 ARHGAP1Q07960 439 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
TOM1-215ENST00000491987 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 NEK1Q96PY6 1258 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 SEZ6LQ9BYH1 1024 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 SLC12A7Q9Y666 1083 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
TOM1-215ENST00000491987 NEFLP07196 543 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 CALM1P0DP23 149 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 CALM2P0DP24 149 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 CALM3P0DP25 149 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 CSF2RAP15509 400 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 GNAQP50148 359 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.372e-7■■■■■ 26.9
TOM1-215ENST00000491987 PGM5Q15124 567 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 FAM47CQ5HY64 1035 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 TMEM199Q8N511 208 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
TOM1-215ENST00000491987 SAMD3Q8N6K7 520 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 AFG1LQ8WV93 481 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 TCEANC2Q96MN5 208 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms