RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 GCOM1H8Y6P7 765 aaPredicted RBP17.52■□□□□ 0.4
SS18L1-204ENST00000491916 ADAMTS3O15072 1205 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
SS18L1-204ENST00000491916 ADAMTS4O75173 837 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 LARGE1O95461 756 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 POLR2MP0CAP2 368 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 ADCYAP1R1P41586 468 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 NKX3-2P78367 333 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 MLLT1Q03111 559 aaPredicted RBP17.52■□□□□ 0.4
SS18L1-204ENST00000491916 SCRN1Q12765 414 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.4
SS18L1-204ENST00000491916 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
SS18L1-204ENST00000491916 PHKBQ93100 1093 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 VTA1Q9NP79 307 aa17.52■□□□□ 0.4
SS18L1-204ENST00000491916 PFKFB2O60825 505 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 PPFIA3O75145 1194 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 DUSP11O75319 330 aaKnown RBP17.51■□□□□ 0.39
SS18L1-204ENST00000491916 RGS20O76081 388 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 PGK1P00558 417 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 SMPD1P17405 629 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 EIF2AK2P19525 551 aaKnown RBP17.51■□□□□ 0.39
SS18L1-204ENST00000491916 NEK4P51957 841 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 STK3Q13188 491 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 LRRC41Q15345 812 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-204ENST00000491916 CCSAPQ6IQ19 270 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-204ENST00000491916 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 KLHDC9Q8NEP7 349 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 PDCD2LQ9BRP1 358 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 UPF3AQ9H1J1 476 aaKnown RBP17.51■□□□□ 0.39
SS18L1-204ENST00000491916 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
SS18L1-204ENST00000491916 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 CTDNEP1O95476 244 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 NR3C2P08235 984 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 RARBP10826 455 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 ST3GAL1Q11201 340 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 PGM5Q15124 567 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 ME3Q16798 604 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 IQSEC1Q6DN90 963 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 PSTPIP2Q9H939 334 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 XPNPEP3Q9NQH7 507 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 KIAA1217Q5T5P2 1943 aa17.5■□□□□ 0.39
SS18L1-204ENST00000491916 DNM1LO00429 736 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 DTNBO60941 627 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 ARIH2O95376 493 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 SCG2P13521 617 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 GJA9P57773 515 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 TNFAIP2Q03169 654 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 PDE4DQ08499 809 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 UBE2SQ16763 222 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 CCDC62Q6P9F0 684 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 FCHSD1Q86WN1 690 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
SS18L1-204ENST00000491916 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
SS18L1-204ENST00000491916 hCG_1984214I3L0E3 225 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 CLK2P49760 499 aaKnown RBP17.48■□□□□ 0.39
SS18L1-204ENST00000491916 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
SS18L1-204ENST00000491916 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 DUSP28Q4G0W2 176 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 PPP1R18Q6NYC8 613 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 ZNF713Q8N859 430 aaPredicted RBP17.48■□□□□ 0.39
SS18L1-204ENST00000491916 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
SS18L1-204ENST00000491916 EIF3JO75822 258 aaKnown RBP17.47■□□□□ 0.39
SS18L1-204ENST00000491916 CST5P28325 142 aaPredicted RBP17.47■□□□□ 0.39
SS18L1-204ENST00000491916 NAPAP54920 295 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 STXBP2Q15833 593 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 ARRDC4Q8NCT1 418 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
SS18L1-204ENST00000491916 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 C11orf49Q9H6J7 331 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 Q9Y3F1 56 aa17.47■□□□□ 0.39
SS18L1-204ENST00000491916 SMCO2A6NFE2 343 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 NOL8Q76FK4 1167 aaKnown RBP17.46■□□□□ 0.39
SS18L1-204ENST00000491916 SMARCC2Q8TAQ2 1214 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 COPS5Q92905 334 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 AIFM3Q96NN9 605 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 SLKQ9H2G2 1235 aaPredicted RBP17.46■□□□□ 0.39
SS18L1-204ENST00000491916 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
SS18L1-204ENST00000491916 PHF24Q9UPV7 400 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 CEP290O15078 2479 aa17.46■□□□□ 0.39
SS18L1-204ENST00000491916 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 B4DLN1 442 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
SS18L1-204ENST00000491916 SEMA3FQ13275 785 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 KCNA10Q16322 511 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 TLK2Q86UE8 772 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 TEX2Q8IWB9 1127 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms