RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ABCB11O95342 1321 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 KLF18A0A0U1RQI7 1052 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 PTPDC1A2A3K4 754 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 UBE2HP62256 183 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 MLLT1Q03111 559 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 RUFY3Q7L099 469 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 UBE2Q1Q7Z7E8 422 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 BRF1Q92994 677 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 PRIMPOLQ96LW4 560 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 AGXT2Q9BYV1 514 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 ALPK3Q96L96 1907 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 SYNGAP1Q96PV0 1343 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CALM1P0DP23 149 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CALM2P0DP24 149 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CALM3P0DP25 149 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 ZSCAN22P10073 491 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CALML3P27482 149 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 RPS6P62753 249 aaKnown RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 RNF207Q6ZRF8 634 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 DIS3LQ8TF46 1054 aaKnown RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 AMNQ9BXJ7 453 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 COL20A1Q9P218 1284 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 DDX20Q9UHI6 824 aaKnown RBP10.79□□□□□ -0.68
BRCA1-219ENST00000491747 OGDHLQ9ULD0 1010 aa10.79□□□□□ -0.68
BRCA1-219ENST00000491747 PNMA6FA0A0J9YX94 578 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 hCG_1642624A0A1W2PR95 340 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 PSMA5P28066 241 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 CDC27P30260 824 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 KIF5BP33176 963 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 TOB2Q14106 344 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-219ENST00000491747 TMTC3Q6ZXV5 915 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 FBXL16Q8N461 479 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 MSL3Q8N5Y2 521 aaKnown RBP10.78□□□□□ -0.68
BRCA1-219ENST00000491747 LARP6Q9BRS8 491 aaKnown RBP10.78□□□□□ -0.68
BRCA1-219ENST00000491747 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 PCDHA1Q9Y5I3 950 aa10.78□□□□□ -0.68
BRCA1-219ENST00000491747 SEPT4O43236 478 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 ZBTB43O43298 467 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 ADCY6O43306 1168 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 STX6O43752 255 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 SMARCA1P28370 1054 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 RGS22Q8NE09 1264 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 LENG1Q96BZ8 264 aaPredicted RBP10.77□□□□□ -0.68
BRCA1-219ENST00000491747 TM6SF1Q9BZW5 370 aa10.77□□□□□ -0.68
BRCA1-219ENST00000491747 ALDH5A1P51649 535 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-219ENST00000491747 FUT2Q10981 343 aa10.77□□□□□ -0.69
BRCA1-219ENST00000491747 ACVR2BQ13705 512 aa10.77□□□□□ -0.69
BRCA1-219ENST00000491747 SYNE3Q6ZMZ3 975 aa10.77□□□□□ -0.69
BRCA1-219ENST00000491747 TAAR1Q96RJ0 339 aa10.77□□□□□ -0.69
BRCA1-219ENST00000491747 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
BRCA1-219ENST00000491747 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.69
BRCA1-219ENST00000491747 GOLGA8AA7E2F4 631 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 ADCY5O95622 1261 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 GNAQP50148 359 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 FGD1P98174 961 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 RTN1Q16799 776 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 TMEM63BQ5T3F8 832 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 SYTL5Q8TDW5 730 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 MORC4Q8TE76 937 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 PAWRQ96IZ0 340 aaKnown RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 NRBP1Q9UHY1 535 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 ZHX1Q9UKY1 873 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 CNPY2Q9Y2B0 182 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 CYP46A1Q9Y6A2 500 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 TCHHQ07283 1943 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 CNTNAP5Q8WYK1 1306 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 KIAA1217Q5T5P2 1943 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 FARP2O94887 1054 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 F13A1P00488 732 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 CFBP00751 764 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 SYT1P21579 422 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 PTGS1P23219 599 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 AK2P54819 239 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 IRX5P78411 483 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
BRCA1-219ENST00000491747 ABHD16BQ9H3Z7 469 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
BRCA1-219ENST00000491747 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 ASB14A6NK59 587 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 HSD17B4P51659 736 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 EVCP57679 992 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 GHRHRQ02643 423 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms