RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 VWCEQ96DN2 955 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 CXXC1Q9P0U4 656 aaPredicted RBP12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 ADD3Q9UEY8 706 aaKnown RBP12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 Q9Y3F1 56 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 MYH7BA7E2Y1 1941 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 CABYRO75952 493 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 CCL23P55773 120 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 KRT32Q14532 448 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 TMEM199Q8N511 208 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 PBX4Q9BYU1 374 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 TRMT13Q9NUP7 481 aaKnown RBP12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
TMEM39A-211ENST00000491685 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.35
TMEM39A-211ENST00000491685 DOCK5Q9H7D0 1870 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 ERICH2A1L162 156 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 MYL3P08590 195 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 PDE4DQ08499 809 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 NECTIN1Q15223 517 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 ADGRF4Q8IZF3 695 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 USP38Q8NB14 1042 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 SCLYQ96I15 445 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 TAF6LQ9Y6J9 622 aa12.83□□□□□ -0.36
TMEM39A-211ENST00000491685 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 LOC102724159A0A0B4J2E5 919 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 ZEB2O60315 1214 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 CYP2C9P11712 490 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 PWP2Q15269 919 aaKnown RBP12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 PSRC1Q6PGN9 363 aaPredicted RBP12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 TAAR1Q96RJ0 339 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 SEZ6LQ9BYH1 1024 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 ZNF576Q9H609 170 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 JMJD4Q9H9V9 463 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
TMEM39A-211ENST00000491685 OPLAHO14841 1288 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 PPP1R11O60927 126 aaPredicted RBP12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 CYP21A2P08686 494 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 PSMA5P28066 241 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 PLA2G5P39877 138 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 SEC23AQ15436 765 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 ASPRV1Q53RT3 343 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 OTOP2Q7RTS6 562 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 HERVK_113Q902F9 699 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 YBX2Q9Y2T7 364 aaKnown RBP12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 ABCB11O95342 1321 aa12.81□□□□□ -0.36
TMEM39A-211ENST00000491685 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 CHD7Q9P2D1 2997 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 B4DLN1 442 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 E7EWF7 191 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 SLC27A2O14975 620 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 TXNP10599 105 aaKnown RBP12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 CPT1AP50416 773 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 NBPF20Q3BBV1 942 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 SCFD2Q8WU76 684 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
TMEM39A-211ENST00000491685 NCOR1O75376 2440 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 458.3 ms