RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NYAP1Q6ZVC0 841 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 PAXIP1Q6ZW49 1069 aaPredicted RBP25.78■■□□□ 1.72
USF3-203ENST00000491165 CPXCR1Q8N123 301 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 PHF20Q9BVI0 1012 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 CENPFP49454 3210 aa25.77■■□□□ 1.72
USF3-203ENST00000491165 IGF2BP3O00425 579 aaKnown RBP eCLIP25.77■■□□□ 1.72
USF3-203ENST00000491165 PFKFB1P16118 471 aa25.77■■□□□ 1.72
USF3-203ENST00000491165 TPM4P67936 248 aa25.77■■□□□ 1.72
USF3-203ENST00000491165 RAVER2Q9HCJ3 691 aaKnown RBP25.77■■□□□ 1.72
USF3-203ENST00000491165 TESPA1A2RU30 521 aaPredicted RBP25.76■■□□□ 1.71
USF3-203ENST00000491165 RASSF10A6NK89 507 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 PDHXO00330 501 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 TMEM132BQ14DG7 1078 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 SLC39A14Q15043 492 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 OXER1Q8TDS5 423 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 ZNF592Q92610 1267 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 KCND1Q9NSA2 647 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 ZNF214Q9UL59 606 aaPredicted RBP25.76■■□□□ 1.71
USF3-203ENST00000491165 PCDHA1Q9Y5I3 950 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 MMP1P03956 469 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 IRX3P78415 501 aaPredicted RBP25.76■■□□□ 1.71
USF3-203ENST00000491165 FBXO11Q86XK2 927 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 AMNQ9BXJ7 453 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 HOXC10Q9NYD6 342 aa25.76■■□□□ 1.71
USF3-203ENST00000491165 OPLAHO14841 1288 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 NAPAP54920 295 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 HERVK_113P62684 666 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 CCDC102AQ96A19 550 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 RIPK3Q9Y572 518 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 CCAR2Q8N163 923 aaKnown RBP25.75■■□□□ 1.71
USF3-203ENST00000491165 TXNRD2Q9NNW7 524 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 BTBD7Q9P203 1132 aa25.75■■□□□ 1.71
USF3-203ENST00000491165 MYPNQ86TC9 1320 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 BIN1O00499 593 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 SMC2O95347 1197 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 ICAM1P05362 532 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 DEFB115Q30KQ5 88 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 LBX2Q6XYB7 198 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 ANKRD23Q86SG2 305 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 TIGD1Q96MW7 591 aa25.74■■□□□ 1.71
USF3-203ENST00000491165 XPO4Q9C0E2 1151 aaKnown RBP25.74■■□□□ 1.71
USF3-203ENST00000491165 BTBD18B2RXH4 712 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 AOC2O75106 756 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 CBX1P83916 185 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 NR5A1Q13285 461 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 NOM1Q5C9Z4 860 aaKnown RBP25.73■■□□□ 1.71
USF3-203ENST00000491165 ZMYND12Q9H0C1 365 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 SH3GLB2Q9NR46 395 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 IFNKQ9P0W0 207 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 JMYQ8N9B5 988 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 CCDC150Q8NCX0 1101 aa25.73■■□□□ 1.71
USF3-203ENST00000491165 MANSC4A6NHS7 340 aaPredicted RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 PPP6R2O75170 966 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 CNMDO75829 334 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 MARCKSP29966 332 aaPredicted RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 TRIM29Q14134 588 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 DHX8Q14562 1220 aaKnown RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 DIS3L2Q8IYB7 885 aaKnown RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 RASGRP4Q8TDF6 673 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 PKNOX2Q96KN3 472 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 R3HDMLQ9H3Y0 253 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 CCPG1Q9ULG6 757 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 SMCO2A6NFE2 343 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 SYKP43405 635 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 NLRP5P59047 1200 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 GNL2Q13823 731 aaKnown RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 CAPNS2Q96L46 248 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 TRMT1Q9NXH9 659 aaKnown RBP25.72■■□□□ 1.71
USF3-203ENST00000491165 RBPJLQ9UBG7 517 aa25.72■■□□□ 1.71
USF3-203ENST00000491165 ZBED4O75132 1171 aa25.71■■□□□ 1.71
USF3-203ENST00000491165 XBP1P17861 261 aa25.71■■□□□ 1.71
USF3-203ENST00000491165 EARS2Q5JPH6 523 aaKnown RBP25.71■■□□□ 1.71
USF3-203ENST00000491165 HOMER2Q9NSB8 354 aa25.71■■□□□ 1.71
USF3-203ENST00000491165 hCG_1984214I3L0E3 225 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 KIF2AO00139 706 aaPredicted RBP25.7■■□□□ 1.71
USF3-203ENST00000491165 OSBPP22059 807 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 U2AF2P26368 475 aaKnown RBP eCLIP25.7■■□□□ 1.71
USF3-203ENST00000491165 PABPC4Q13310 644 aaKnown RBP eCLIP25.7■■□□□ 1.71
USF3-203ENST00000491165 NCAPHQ15003 741 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 TMC6Q7Z403 805 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 ZNF713Q8N859 430 aaPredicted RBP25.7■■□□□ 1.71
USF3-203ENST00000491165 TBC1D5Q92609 795 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 PAGR1Q9BTK6 254 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 SLC45A1Q9Y2W3 748 aa25.7■■□□□ 1.71
USF3-203ENST00000491165 M0R2N6 131 aa25.7■■□□□ 1.7
USF3-203ENST00000491165 IKBKBO14920 756 aa25.7■■□□□ 1.7
USF3-203ENST00000491165 Q3C1V9 767 aa25.7■■□□□ 1.7
USF3-203ENST00000491165 MUM1L1Q5H9M0 696 aa25.7■■□□□ 1.7
USF3-203ENST00000491165 SNRNP48Q6IEG0 339 aaKnown RBP25.7■■□□□ 1.7
USF3-203ENST00000491165 CGNQ9P2M7 1197 aaKnown RBP25.7■■□□□ 1.7
USF3-203ENST00000491165 HPSEQ9Y251 543 aa25.7■■□□□ 1.7
USF3-203ENST00000491165 FAM205CA6NFA0 338 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 PLS1Q14651 629 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 IFNL1Q8IU54 200 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 CCDC148Q8NFR7 591 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 PRDM10Q9NQV6 1147 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 NFIBO00712 420 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 FDX1P10109 184 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 ALAS1P13196 640 aa25.69■■□□□ 1.7
USF3-203ENST00000491165 UBE2SQ16763 222 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms