RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 NOL8Q76FK4 1167 aaKnown RBP17.63■□□□□ 0.41
COL27A1-206ENST00000490831 ANKRD33Q7Z3H0 272 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 GLT1D1Q96MS3 346 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 TOX2Q96NM4 488 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 RMDN3Q96TC7 470 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 PDLIM7Q9NR12 457 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 CABYRO75952 493 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 CFBP00751 764 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 PTGS1P23219 599 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 CDK7P50613 346 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 BEX3Q00994 111 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 TLE2Q04725 743 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 SRBD1Q8N5C6 995 aaKnown RBP17.62■□□□□ 0.41
COL27A1-206ENST00000490831 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 PXMP2Q9NR77 195 aa17.62■□□□□ 0.41
COL27A1-206ENST00000490831 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 CCDC62Q6P9F0 684 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 RRP36Q96EU6 259 aaKnown RBP17.61■□□□□ 0.41
COL27A1-206ENST00000490831 PRKAG2Q9UGJ0 569 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 LTBP2Q14767 1821 aa17.61■□□□□ 0.41
COL27A1-206ENST00000490831 LAMA3Q16787 3333 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-206ENST00000490831 TRIM43BA6NCK2 446 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 GCOM1H8Y6P7 765 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-206ENST00000490831 ARVCFO00192 962 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 ZEB2O60315 1214 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 NR3C2P08235 984 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 POLR2MP0CAP2 368 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 RXRAP19793 462 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 RCAN1P53805 252 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 STXBP2Q15833 593 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 ARHGEF16Q5VV41 709 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 TRIM43Q96BQ3 446 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-206ENST00000490831 SEZ6LQ9BYH1 1024 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
COL27A1-206ENST00000490831 FRMPD4Q14CM0 1322 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 KIAA0355O15063 1070 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
COL27A1-206ENST00000490831 ARIH2O95376 493 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 CLTBP09497 229 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
COL27A1-206ENST00000490831 HOXA13P31271 388 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-206ENST00000490831 FAAP100Q0VG06 881 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 TTLL4Q14679 1199 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 CXCL17Q6UXB2 119 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 SH3RF1Q7Z6J0 888 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 MICU3Q86XE3 530 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
COL27A1-206ENST00000490831 BRPF3Q9ULD4 1205 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
COL27A1-206ENST00000490831 A6NJR5 290 aa17.58■□□□□ 0.4
COL27A1-206ENST00000490831 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
COL27A1-206ENST00000490831 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
COL27A1-206ENST00000490831 TXNP10599 105 aaKnown RBP17.58■□□□□ 0.4
COL27A1-206ENST00000490831 CPT1AP50416 773 aa17.58■□□□□ 0.4
COL27A1-206ENST00000490831 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-206ENST00000490831 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.4
COL27A1-206ENST00000490831 LBHD1Q9BQE6 289 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-206ENST00000490831 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
COL27A1-206ENST00000490831 PCDH10Q9P2E7 1040 aa17.58■□□□□ 0.4
COL27A1-206ENST00000490831 GRIN2DO15399 1336 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 FUT2Q10981 343 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 PGM5Q15124 567 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 RAB11FIP4Q86YS3 637 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 FAM126BQ8IXS8 530 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 TDHQ8IZJ6 230 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 CMTR1Q8N1G2 835 aaKnown RBP17.57■□□□□ 0.4
COL27A1-206ENST00000490831 OR6J1Q8NGC5 347 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 COPS5Q92905 334 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
COL27A1-206ENST00000490831 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
COL27A1-206ENST00000490831 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 TBX21Q9UL17 535 aa17.57■□□□□ 0.4
COL27A1-206ENST00000490831 CNTNAP5Q8WYK1 1306 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 ZBTB43O43298 467 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 RGS20O76081 388 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 ITGB8P26012 769 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
COL27A1-206ENST00000490831 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 BLOC1S2Q6QNY1 142 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 SEPT14Q6ZU15 432 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-206ENST00000490831 VTI1AQ96AJ9 217 aa17.56■□□□□ 0.4
COL27A1-206ENST00000490831 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms