RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 TRIM4Q9C037 500 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 DDX47Q9H0S4 455 aaKnown RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 SUDS3Q9H7L9 328 aaPredicted RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 RNF225M0QZC1 329 aaPredicted RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 PRKAB2O43741 272 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 AP1G2O75843 785 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 CPP00450 1065 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 MMEP08473 750 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 SCARF1Q14162 830 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 IFI16Q16666 785 aaKnown RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 SFMBT2Q5VUG0 894 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 FAM153BP0C7A2 387 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 IFNAR1P17181 557 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 SETDB1Q15047 1291 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 FAM153CQ494X1 144 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 FAM153AQ9UHL3 310 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 PDE6AP16499 860 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 PLTPP55058 493 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 MTMR3Q13615 1198 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
PCSK9-202ENST00000490692 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 ADAMTS1Q9UHI8 967 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
PCSK9-202ENST00000490692 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 EEF1GP26641 437 aaKnown RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 GBP1P32455 592 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 HERVK_113P62684 666 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 PPP2R2AP63151 447 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 LRRC14Q15048 493 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 TSNAXIP1Q2TAA8 658 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 RPUSD2Q8IZ73 545 aaKnown RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.391e-6■□□□□ 9.3
PCSK9-202ENST00000490692 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ABCB4P21439 1286 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 KCNB1Q14721 858 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 WHAMMQ8TF30 809 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 GOLPH3Q9H4A6 298 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 USH1CQ9Y6N9 552 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 TNKSO95271 1327 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 NEDD4P46934 1319 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 TXKP42681 527 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 SCTRP47872 440 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ZNF131P52739 623 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 LRRC41Q15345 812 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 CCDC84Q86UT8 332 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 UPP2O95045 317 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ANP32DO95626 131 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 SLC5A1P13866 664 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 ZBTB16Q05516 673 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 GDAP1Q8TB36 358 aa12.63□□□□□ -0.39
PCSK9-202ENST00000490692 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCSK9-202ENST00000490692 SEMA3EO15041 775 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 ASIC2Q16515 512 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
PCSK9-202ENST00000490692 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
PCSK9-202ENST00000490692 LRRC53A6NM62 1247 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 FSBPO95073 299 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 GLI1P08151 1106 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 SLC1A4P43007 532 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 INF2Q27J81 1249 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 COL15A1P39059 1388 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 CETN3O15182 167 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 NUGGCQ68CJ6 796 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 CUL5Q93034 780 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 MAP3K14Q99558 947 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 JAG2Q9Y219 1238 aa12.62□□□□□ -0.39
PCSK9-202ENST00000490692 AGPSO00116 658 aa12.61□□□□□ -0.39
PCSK9-202ENST00000490692 TRIM37O94972 964 aa12.61□□□□□ -0.39
PCSK9-202ENST00000490692 CABP7Q86V35 215 aa12.61□□□□□ -0.39
PCSK9-202ENST00000490692 LIMA1Q9UHB6 759 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms