RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
NINJ1-205ENST00000490564 CFBP00751 764 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
NINJ1-205ENST00000490564 HSPA4P34932 840 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
NINJ1-205ENST00000490564 BEX3Q00994 111 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 FSCN1Q16658 493 aaKnown RBP12.11□□□□□ -0.47
NINJ1-205ENST00000490564 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
NINJ1-205ENST00000490564 ZEB2O60315 1214 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 CABYRO75952 493 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 REC8O95072 547 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 PLEKHA8P1O95397 391 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 RXRAP19793 462 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 CDK7P50613 346 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 MDM2Q00987 491 aaPredicted RBP12.1□□□□□ -0.47
NINJ1-205ENST00000490564 TLE2Q04725 743 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 STXBP2Q15833 593 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 ARHGEF16Q5VV41 709 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 SRBD1Q8N5C6 995 aaKnown RBP12.1□□□□□ -0.47
NINJ1-205ENST00000490564 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
NINJ1-205ENST00000490564 TOX2Q96NM4 488 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 LAMA3Q16787 3333 aa12.1□□□□□ -0.47
NINJ1-205ENST00000490564 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 ARVCFO00192 962 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 CLTBP09497 229 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 PPP2R5BQ15173 497 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 APOA5Q6Q788 366 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 TMTC3Q6ZXV5 915 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 OR6J1Q8NGC5 347 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 TCEANC2Q96MN5 208 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 PDCD2LQ9BRP1 358 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
NINJ1-205ENST00000490564 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
NINJ1-205ENST00000490564 TRIM43BA6NCK2 446 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 ARIH2O95376 493 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 NR3C2P08235 984 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 HOXA13P31271 388 aaPredicted RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 CPT1AP50416 773 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 PGM5Q15124 567 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 RAB11FIP4Q86YS3 637 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 CMTR1Q8N1G2 835 aaKnown RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 COPS5Q92905 334 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 VTI1AQ96AJ9 217 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 TRIM43Q96BQ3 446 aaPredicted RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 SEZ6LQ9BYH1 1024 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 RBM28Q9NW13 759 aaKnown RBP12.08□□□□□ -0.48
NINJ1-205ENST00000490564 BRPF3Q9ULD4 1205 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
NINJ1-205ENST00000490564 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 RBAK-RBAKDNI3L0D1 243 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 ZBTB43O43298 467 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 RCAN1P53805 252 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 FAM126BQ8IXS8 530 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 FBXL16Q8N461 479 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
NINJ1-205ENST00000490564 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 CNTNAP5Q8WYK1 1306 aa12.07□□□□□ -0.48
NINJ1-205ENST00000490564 NID2Q14112 1375 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 DOCK5Q9H7D0 1870 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 A6NJR5 290 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 CD4P01730 458 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 CPA1P15085 419 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 ITGB8P26012 769 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms