RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MYO5AQ9Y4I1 1855 aaKnown RBP8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 ASTN1O14525 1302 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 SIP14410 1827 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 KRT37O76014 449 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 BAG3O95817 575 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 PFKMP08237 780 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 ARID4AP29374 1257 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 MCAMP43121 646 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 KCTD2Q14681 263 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 SEPT2Q15019 361 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 CCDC144BQ3MJ40 725 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 CERKLQ49MI3 558 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 HERC4Q5GLZ8 1057 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 ATF7IPQ6VMQ6 1270 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 RIOX2Q8IUF8 465 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 FGD4Q96M96 766 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 ZFP42Q96MM3 310 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 KATNBL1Q9H079 304 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 SUGCTQ9HAC7 445 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 SERPINB13Q9UIV8 391 aa8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 ZNF214Q9UL59 606 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-203ENST00000490391 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 DNAJC25-GNG10A0A024R161 153 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 DDX11L8A8MPP1 907 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 H3BQ06 376 aaPredicted RBP8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 FLOT1O75955 427 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 BEX3Q00994 111 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 ITGA7Q13683 1181 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 ACVR2BQ13705 512 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 NAA16Q6N069 864 aaPredicted RBP8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 CXCL17Q6UXB2 119 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 ADHFE1Q8IWW8 467 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 REPS2Q8NFH8 660 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 PRRX2Q99811 253 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 NOL10Q9BSC4 688 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 SPC25Q9HBM1 224 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 MUTYHQ9UIF7 546 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 COL4A6Q14031 1691 aa8.72□□□□□ -1.01
PDLIM1-203ENST00000490391 FAM208BQ5VWN6 2430 aa8.71□□□□□ -1.01
PDLIM1-203ENST00000490391 KIF28PB7ZC32 967 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 PROB1E7EW31 1015 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 SIAH2O43255 324 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 ERVK-21P61565 698 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 ASCL5Q7RTU5 278 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 SIAH1Q8IUQ4 282 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
PDLIM1-203ENST00000490391 CABYRO75952 493 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 CYP2C9P11712 490 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 ACTN1P12814 892 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 STAT3P40763 770 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 DYNLL1P63167 89 aaKnown RBP8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 GABPAQ06546 454 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 TFCP2Q12800 502 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 PKN1Q16512 942 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 SPICE1Q8N0Z3 855 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 MAGEB6Q8N7X4 407 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 EDAQ92838 391 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 UPF3BQ9BZI7 483 aaKnown RBP8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 ALDH8A1Q9H2A2 487 aaPredicted RBP8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 ABHD16BQ9H3Z7 469 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 FBXO28Q9NVF7 368 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 MTUS1Q9ULD2 1270 aa8.7□□□□□ -1.02
PDLIM1-203ENST00000490391 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 TMEM221A6NGB7 291 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 M0R296 226 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 VWA5AO00534 786 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 PTGS1P23219 599 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 RFC2P35250 354 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 PLCD1P51178 756 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 PSMC6P62333 389 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 TMCO2Q7Z6W1 182 aaPredicted RBP8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 TRMT13Q9NUP7 481 aaKnown RBP8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 GNEQ9Y223 722 aaKnown RBP8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 WASF2Q9Y6W5 498 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 SCN10AQ9Y5Y9 1956 aa8.69□□□□□ -1.02
PDLIM1-203ENST00000490391 OTOGLQ3ZCN5 2332 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 MED19A0JLT2 244 aaPredicted RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 LINC01553A4QN01 128 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 PRR23AA6NEV1 266 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 COPB2P35606 906 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 LTBRP36941 435 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 ID4P47928 161 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 VCPP55072 806 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 SMAD2Q15796 467 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms