RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 DCDC2CA8MYV0 355 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 HSD17B4P51659 736 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 GHRHRQ02643 423 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 CXCL17Q6UXB2 119 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 OR6J1Q8NGC5 347 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 TRIM43Q96BQ3 446 aaPredicted RBP22.9■■□□□ 1.26
SMC4-222ENST00000490207 TOX2Q96NM4 488 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 SPZ1Q9BXG8 430 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 ARVCFO00192 962 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 NKRFO15226 690 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMC4-222ENST00000490207 CABYRO75952 493 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 ARHGEF16Q5VV41 709 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 PIBF1Q8WXW3 757 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 NEK1Q96PY6 1258 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 IWS1Q96ST2 819 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 PXMP2Q9NR77 195 aa22.89■■□□□ 1.25
SMC4-222ENST00000490207 MAP3K20Q9NYL2 800 aaKnown RBP22.89■■□□□ 1.25
SMC4-222ENST00000490207 CALM1P0DP23 149 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 CALM2P0DP24 149 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 CALM3P0DP25 149 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 EIF2AK2P19525 551 aaKnown RBP22.88■■□□□ 1.25
SMC4-222ENST00000490207 RXRAP19793 462 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 FAAP100Q0VG06 881 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 TTLL4Q14679 1199 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 SAMD3Q8N6K7 520 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 BADQ92934 168 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 LZTS2Q9BRK4 669 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 TMEM39AQ9NV64 488 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
SMC4-222ENST00000490207 SOX1O00570 391 aaPredicted RBP22.87■■□□□ 1.25
SMC4-222ENST00000490207 KIAA0355O15063 1070 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 PLEKHA8P1O95397 391 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 GNAQP50148 359 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 CPT1AP50416 773 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 CDK7P50613 346 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 KRT32Q14532 448 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 STXBP2Q15833 593 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 SGMS1Q86VZ5 419 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 RAB11FIP4Q86YS3 637 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 RASEFQ8IZ41 740 aa22.87■■□□□ 1.25
SMC4-222ENST00000490207 RRP36Q96EU6 259 aaKnown RBP22.87■■□□□ 1.25
SMC4-222ENST00000490207 ARIH2O95376 493 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 TXNP10599 105 aaKnown RBP22.86■■□□□ 1.25
SMC4-222ENST00000490207 RAG1P15918 1043 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 SMARCA1P28370 1054 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 HOXA13P31271 388 aaPredicted RBP22.86■■□□□ 1.25
SMC4-222ENST00000490207 TSGA10IPQ3SY00 556 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 SEPT14Q6ZU15 432 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 MICU3Q86XE3 530 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 COPS5Q92905 334 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 POLR3EQ9NVU0 708 aa22.86■■□□□ 1.25
SMC4-222ENST00000490207 SEC63Q9UGP8 760 aaKnown RBP22.86■■□□□ 1.25
SMC4-222ENST00000490207 GCOM1H8Y6P7 765 aaPredicted RBP22.85■■□□□ 1.25
SMC4-222ENST00000490207 TLR3O15455 904 aaKnown RBP22.85■■□□□ 1.25
SMC4-222ENST00000490207 POLR2MP0CAP2 368 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 ITGB8P26012 769 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 BRDTQ58F21 947 aaPredicted RBP22.85■■□□□ 1.25
SMC4-222ENST00000490207 FAM126BQ8IXS8 530 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 LRCH3Q96II8 777 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 TCEANC2Q96MN5 208 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 TBX21Q9UL17 535 aa22.85■■□□□ 1.25
SMC4-222ENST00000490207 LAMA3Q16787 3333 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 SCN10AQ9Y5Y9 1956 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 NR3C2P08235 984 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 MYL3P08590 195 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 ITGA7Q13683 1181 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 LRIT3Q3SXY7 679 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 DHX32Q7L7V1 743 aaKnown RBP22.84■■□□□ 1.25
SMC4-222ENST00000490207 SRBD1Q8N5C6 995 aaKnown RBP22.84■■□□□ 1.25
SMC4-222ENST00000490207 SLC43A3Q8NBI5 491 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 PDCD2LQ9BRP1 358 aa22.84■■□□□ 1.25
SMC4-222ENST00000490207 PSMC6P62333 389 aa22.83■■□□□ 1.25
SMC4-222ENST00000490207 EXOSC10Q01780 885 aaKnown RBP22.83■■□□□ 1.25
SMC4-222ENST00000490207 CCDC62Q6P9F0 684 aa22.83■■□□□ 1.25
SMC4-222ENST00000490207 SYNE3Q6ZMZ3 975 aa22.83■■□□□ 1.25
SMC4-222ENST00000490207 CMTR1Q8N1G2 835 aaKnown RBP22.83■■□□□ 1.25
SMC4-222ENST00000490207 SEZ6LQ9BYH1 1024 aa22.83■■□□□ 1.25
SMC4-222ENST00000490207 EIF3JO75822 258 aaKnown RBP22.82■■□□□ 1.24
SMC4-222ENST00000490207 MYCLP12524 364 aaPredicted RBP22.82■■□□□ 1.24
SMC4-222ENST00000490207 PURAQ00577 322 aaKnown RBP22.82■■□□□ 1.24
SMC4-222ENST00000490207 PGM5Q15124 567 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 APOA5Q6Q788 366 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 TMTC3Q6ZXV5 915 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 FCHSD1Q86WN1 690 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 FANCBQ8NB91 859 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 MTG1Q9BT17 334 aaPredicted RBP22.82■■□□□ 1.24
SMC4-222ENST00000490207 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 MYH7BA7E2Y1 1941 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 SZT2Q5T011 3432 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 GRIN2DO15399 1336 aa22.82■■□□□ 1.24
SMC4-222ENST00000490207 REC8O95072 547 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 GH1P01241 217 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 HMGB1P09429 215 aaKnown RBP22.81■■□□□ 1.24
SMC4-222ENST00000490207 HSPA4P34932 840 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 LY6KQ17RY6 165 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 ERICH6BQ5W0A0 696 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 IL31RAQ8NI17 732 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 KCNB2Q92953 911 aa22.81■■□□□ 1.24
SMC4-222ENST00000490207 MRVI1Q9Y6F6 885 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms