RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 A6NJR5 290 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PPP1R11O60927 126 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 OR6J1Q8NGC5 347 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SCFD2Q8WU76 684 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 HIPK3Q9H422 1215 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SENP2Q9HC62 589 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 POLR3EQ9NVU0 708 aa22.66■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SPTBN5Q9NRC6 3674 aaKnown RBP22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PALM3A6NDB9 673 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 TXNP10599 105 aaKnown RBP22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CPT1AP50416 773 aa22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PPP2R5BQ15173 497 aa22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 FBXO11Q86XK2 927 aa22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 WNT8AQ9H1J5 351 aa22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 IL23AQ9NPF7 189 aa22.65■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CUL9Q8IWT3 2517 aa22.64■■□□□ 1.22
TNFRSF1B-202ENST00000489921 GRXCR1A8MXD5 290 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 SGSM2O43147 1006 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MYL3P08590 195 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 DNAJB2P25686 324 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 STOX1Q6ZVD7 989 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MYLIPQ8WY64 445 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TRMT13Q9NUP7 481 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 BAZ2BQ9UIF8 2168 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 GBF1Q92538 1859 aa22.64■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TMEM265A0A087WTH1 108 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 KLRF2D3W0D1 207 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 DLL1O00548 723 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CCL23P55773 120 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 GHRHRQ02643 423 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MCF2L2Q86YR7 1114 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 NSUN6Q8TEA1 469 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PPP1R13LQ8WUF5 828 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 RUFY2Q8WXA3 655 aa22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MPHOSPH6Q99547 160 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MTG1Q9BT17 334 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CXXC1Q9P0U4 656 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MRPL11Q9Y3B7 192 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1B-202ENST00000489921 REV3LO60673 3130 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 SCN5AQ14524 2016 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 E7EWF7 191 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PBX2P40425 430 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 HSD17B4P51659 736 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 LY6KQ17RY6 165 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 NBPF20Q3BBV1 942 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PSRC1Q6PGN9 363 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 HERVK_113Q902F9 699 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MAP4K1Q92918 833 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 IWS1Q96ST2 819 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 RMDN3Q96TC7 470 aa22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 U3KPZ7 1027 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1B-202ENST00000489921 B4DLN1 442 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 DHX16O60231 1041 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CYP2C9P11712 490 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MRPL12P52815 198 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TTLL4Q14679 1199 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 GRIN2CQ14957 1233 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 AMNQ9BXJ7 453 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PBX4Q9BYU1 374 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 RIOX1Q9H6W3 641 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MYH7BA7E2Y1 1941 aa22.61■■□□□ 1.21
TNFRSF1B-202ENST00000489921 ZBTB5O15062 677 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CYTH3O43739 400 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 ANTXR2P58335 489 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 ARHGAP1Q07960 439 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TROAPQ12815 778 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TRDNQ13061 729 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 GRM4Q14833 912 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 STXBP2Q15833 593 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 SEPT14Q6ZU15 432 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CHST3Q7LGC8 479 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 SCLYQ96I15 445 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PXMP2Q9NR77 195 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TRANK1O15050 2925 aa22.6■■□□□ 1.21
TNFRSF1B-202ENST00000489921 IFIT3O14879 490 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 KPNA6O60684 536 aa22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 CFBP00751 764 aa22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 FGBP02675 491 aa22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 EIF2AK2P19525 551 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 IGDCC4Q8TDY8 1250 aa22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 GPHNQ9NQX3 736 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1B-202ENST00000489921 RGS20O76081 388 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 NR3C2P08235 984 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 SUPT20HL2P0C7V6 817 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 COL9A3Q14050 684 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 BRDTQ58F21 947 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 ARHGEF16Q5VV41 709 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 NFRKBQ6P4R8 1299 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MB21D2Q8IYB1 491 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 MAFAQ8NHW3 353 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 AFG1LQ8WV93 481 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 TIFAQ96CG3 184 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 ZNF576Q9H609 170 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 DDX41Q9UJV9 622 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 PCDHA1Q9Y5I3 950 aa22.58■■□□□ 1.21
TNFRSF1B-202ENST00000489921 EIF3JO75822 258 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1B-202ENST00000489921 MMP3P08254 477 aa22.57■■□□□ 1.2
TNFRSF1B-202ENST00000489921 OTOP2Q7RTS6 562 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms