RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 KRTAP10-9P60411 292 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 MVKQ03426 396 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 LAPTM5Q13571 262 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 COL9A2Q14055 689 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 RAB3GAP1Q15042 981 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 GNPTABQ3T906 1256 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 VWA3BQ502W6 1294 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 GPRASP2Q96D09 838 aa4.58□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQH9 124 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 SH3D21A4FU49 640 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 FGF10O15520 208 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 CD3EP07766 207 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 ITGA4P13612 1032 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 IFNGR1P15260 489 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 NOP2P46087 812 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 GIPRP48546 466 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 NANOS3P60323 173 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 PPP2R5DQ14738 602 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 HLA-DQA1Q5Y7H0 255 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 ANKRD13AQ8IZ07 590 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 FAM9AQ8IZU1 332 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 ADCY4Q8NFM4 1077 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 RASGRP4Q8TDF6 673 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 ZDHHC15Q96MV8 337 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 HAUS7Q99871 368 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 SRRTQ9BXP5 876 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 TNFRSF12AQ9NP84 129 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1B0GTL3 188 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQ27 194 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQ64 194 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQC6 194 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQD8 194 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 CANXP27824 592 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 LIMS1P48059 325 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 NASPP49321 788 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 TCEAL1Q15170 157 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 TMED8Q6PL24 325 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 JAMLQ86YT9 394 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 DNAJC10Q8IXB1 793 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 ADGRG2Q8IZP9 1017 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 CHFRQ96EP1 664 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 MCMBPQ9BTE3 642 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 PIF1Q9H611 641 aa4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 SF3B6Q9Y3B4 125 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-204ENST00000489862 MARCH6O60337 910 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 VAMP4O75379 141 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 GJA8P48165 433 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 NCKAP1LP55160 1127 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 POU4F1Q01851 419 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 TARBP2Q15633 366 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 PPP2R5EQ16537 467 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 GLB1LQ6UWU2 654 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 RPTNQ6XPR3 784 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 FNIP1Q8TF40 1166 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 SHDQ96IW2 340 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 FGD4Q96M96 766 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 ST6GALNAC2Q9UJ37 374 aa4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 DIS3Q9Y2L1 958 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-204ENST00000489862 SBNO2Q9Y2G9 1366 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A087WZG4 1122 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 RAB11FIP3O75154 756 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 EPHX1P07099 455 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 SLC7A5Q01650 507 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 CBX2Q14781 532 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 CDSNQ15517 529 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 TBC1D10BQ4KMP7 808 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 HEATR6Q6AI08 1181 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 CYP2R1Q6VVX0 501 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 ADAT2Q7Z6V5 191 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 SAPCD2Q86UD0 394 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 KLHL6Q8WZ60 621 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 PTCHD1Q96NR3 888 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 TINF2Q9BSI4 451 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 KLHL25Q9H0H3 589 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 ACBD3Q9H3P7 528 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 PHAXQ9H814 394 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 WHRNQ9P202 907 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 SLC12A7Q9Y666 1083 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 PMF1-BGLAPU3KQ54 211 aa4.55□□□□□ -1.68
DEPDC1-204ENST00000489862 IGFBP6P24592 240 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 TACR1P25103 407 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 SF3A1Q15459 793 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 DPY19L1Q2PZI1 675 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 C19orf47Q8N9M1 422 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 OR6P1Q8NGX9 317 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 CPLX3Q8WVH0 158 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 ARID4BQ4LE39 1312 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 A0A1W2PQJ5 194 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 TBC1D8O95759 1140 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 DBHP09172 617 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 BICRALQ6AI39 1079 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 CARFQ8N187 725 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 FAM169BQ8N8A8 192 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 CEP89Q96ST8 783 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms