RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TMEM139Q8IV31 216 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SMYD4Q8IYR2 804 aaPredicted RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 REXO1Q8N1G1 1221 aaKnown RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TC2NQ8N9U0 490 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 NOC3LQ8WTT2 800 aaKnown RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 NELFBQ8WX92 580 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PIGSQ96S52 555 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC94Q9BW85 323 aaPredicted RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 NAA15Q9BXJ9 866 aaKnown RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TMEM60Q9H2L4 133 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ADD3Q9UEY8 706 aaKnown RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PPP2R2CQ9Y2T4 447 aa10.76□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TTLL1O95922 423 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SRGNP10124 158 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PDHBP11177 359 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 AKR1B1P15121 316 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PBX1P40424 430 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PPP1R2P41236 205 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 COPB1P53618 953 aaKnown RBP10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GOLGA8FQ08AF8 430 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GOLGA8DPQ0D2H9 430 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 LETM2Q2VYF4 491 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 HHIPL2Q6UWX4 724 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RASGRP2Q7LDG7 609 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 APTXQ7Z2E3 356 aaKnown RBP10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CNGA4Q8IV77 575 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 REXO1L1PQ8IX06 675 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 LRRC47Q8N1G4 583 aaKnown RBP10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CERS5Q8N5B7 392 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 IGSF22Q8N9C0 903 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZNF775Q96BV0 537 aaPredicted RBP10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MASTLQ96GX5 879 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CPVLQ9H3G5 476 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 USP40Q9NVE5 1235 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PARP3Q9Y6F1 533 aa10.75□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 KCNJ18B7U540 433 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 F8W031 263 aaPredicted RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PSMA7O14818 248 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SNHG28P0DPA3 235 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 FKBP1AP62942 108 aaKnown RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 KCNJ12Q14500 433 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 KRT31Q15323 416 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PTPN21Q16825 1174 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TMEM266Q2M3C6 531 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ADSSL1Q8N142 457 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZNF397Q8NF99 534 aaPredicted RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SPSB2Q99619 263 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 EHD4Q9H223 541 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 VAT1LQ9HCJ6 419 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GDAQ9Y2T3 454 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 FRMPD2Q68DX3 1309 aaPredicted RBP10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ARFGEF1Q9Y6D6 1849 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MYH4Q9Y623 1939 aa10.74□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZNF646O15015 1829 aaPredicted RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 H7C1D1 291 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 N4BP3O15049 544 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TEX33O43247 280 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MFAP3LO75121 409 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RHOBTB3O94955 611 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC175P0C221 793 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PLCG1P19174 1290 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 HOXA7P31268 230 aaPredicted RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SHMT1P34896 483 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ADKP55263 362 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 AMPD3Q01432 767 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZNF543Q08ER8 600 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC96Q2M329 555 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 NAALADL2Q58DX5 795 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GPATCH4Q5T3I0 446 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 JAKMIP3Q5VZ66 844 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CDC42EP5Q6NZY7 148 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TBCKQ8TEA7 893 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC17Q96LX7 622 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 NAP1L4Q99733 375 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SRRTQ9BXP5 876 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 EXOC1Q9NV70 894 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 KBTBD4Q9NVX7 518 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TAB2Q9NYJ8 693 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms