RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CLASRPQ8N2M8 674 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 SH2D3CQ8N5H7 860 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM160A2Q8N612 972 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TSEN2Q8NCE0 465 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ACRBPQ8NEB7 543 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TPCN2Q8NHX9 752 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 NKX2-3Q8TAU0 364 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CAGE1Q8TC20 777 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CPLX3Q8WVH0 158 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TEKT4Q8WW24 435 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 JAKMIP2Q96AA8 810 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 RRP36Q96EU6 259 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 NUDT12Q9BQG2 462 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM4Q9C037 500 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CXXC1Q9P0U4 656 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 GUCA1BQ9UMX6 200 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 G3BP2Q9UN86 482 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PCDHA5Q9Y5H7 936 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 EPN1Q9Y6I3 576 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CAMSAP1Q5T5Y3 1602 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PREX2Q70Z35 1606 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 MAGEB6P1A0A0J9YX57 407 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 GOLGA6L10A0A0M3HER8 536 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 DPPA5A6NC42 116 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF233A6NK53 670 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TEX33O43247 280 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PPP6R2O75170 966 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM37O94972 964 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PENKP01210 267 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP1A1P05023 1023 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PRLRP16471 622 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CASP14P31944 242 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 GTF2IP78347 998 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 MRPS35P82673 323 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PNOCQ13519 176 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 RASA3Q14644 834 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CMPK2Q5EBM0 449 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 NT5DC1Q5TFE4 455 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TMEM132EQ6IEE7 984 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PTCRAQ6ISU1 281 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CACNA2D4Q7Z3S7 1137 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 FOXP4Q8IVH2 680 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIML1Q8N9V2 468 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKRD24Q8TF21 1146 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 AGAP11Q8TF27 550 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF274Q96GC6 653 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM227BQ96M60 508 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 OSBPL1AQ9BXW6 950 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 MMADHCQ9H3L0 296 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 KCNMB3Q9NPA1 279 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PPANQ9NQ55 473 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 INCENPQ9NQS7 918 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 HDAC6Q9UBN7 1215 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 DOLKQ9UPQ8 538 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 LRRC42Q9Y546 428 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 DNMT3AQ9Y6K1 912 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ZMYM6O95789 1325 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SALL1Q9NSC2 1324 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 JCADQ9P266 1359 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP7BP35670 1465 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 MLH3Q9UHC1 1453 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 AGLP35573 1532 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 TULP4Q9NRJ4 1543 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 UGGT1Q9NYU2 1555 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 DEPDC5O75140 1603 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 UBAP1LF5GYI3 381 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PDE2AO00408 941 aaPredicted RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 IFIT3O14879 490 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SRGAP2O75044 1071 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 TAF5LO75529 589 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 RECKO95980 971 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PAEPP09466 180 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 CLTAP09496 248 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 BMP6P22004 513 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 MAPK1P28482 360 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 CDC27P30260 824 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SARSP49591 514 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 VAV2P52735 878 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 ZBED6P86452 979 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 DEUP1Q05D60 604 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PAK2Q13177 524 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 BYSLQ13895 437 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM14Q14142 442 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 CDC37Q16543 378 aaPredicted RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SPRED3Q2MJR0 410 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 SPATA1Q5VX52 437 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 RESP18Q5W5W9 173 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 PDXDC2PQ6P474 469 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 LRIG3Q6UXM1 1119 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 RINLQ6ZS11 566 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 APTXQ7Z2E3 356 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 FBXO33Q7Z6M2 555 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 METTL16Q86W50 562 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 LMNTD2Q8IXW0 634 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 IFT20Q8IY31 132 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 LZICQ8WZA0 190 aa5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 NAF1Q96HR8 494 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-206ENST00000489853 RBM17Q96I25 401 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms