RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 NSUN6Q8TEA1 469 aaKnown RBP28.22■■■□□ 2.11
COPS9-203ENST00000489698 SCFD2Q8WU76 684 aa28.22■■■□□ 2.11
COPS9-203ENST00000489698 MTMR8Q96EF0 704 aa28.22■■■□□ 2.11
COPS9-203ENST00000489698 RMDN3Q96TC7 470 aa28.22■■■□□ 2.11
COPS9-203ENST00000489698 PCDHA1Q9Y5I3 950 aa28.22■■■□□ 2.11
COPS9-203ENST00000489698 SLC27A2O14975 620 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 PPP1R11O60927 126 aaPredicted RBP28.21■■■□□ 2.11
COPS9-203ENST00000489698 TIMP1P01033 207 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 TXNP10599 105 aaKnown RBP28.21■■■□□ 2.11
COPS9-203ENST00000489698 PSMC6P62333 389 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 FPGSQ05932 587 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 TROAPQ12815 778 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 ARHGEF16Q5VV41 709 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 FAM126BQ8IXS8 530 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 PIGSQ96S52 555 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 TBX21Q9UL17 535 aa28.21■■■□□ 2.11
COPS9-203ENST00000489698 PRC1O43663 620 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 MYL3P08590 195 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 CPT1AP50416 773 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 SLC35G1Q2M3R5 365 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 COPS5Q92905 334 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 RIOX1Q9H6W3 641 aa28.2■■■□□ 2.1
COPS9-203ENST00000489698 GPHNQ9NQX3 736 aaPredicted RBP28.2■■■□□ 2.1
COPS9-203ENST00000489698 NKRFO15226 690 aaKnown RBP eCLIP28.19■■■□□ 2.1
COPS9-203ENST00000489698 EIF2AK2P19525 551 aaKnown RBP28.19■■■□□ 2.1
COPS9-203ENST00000489698 EPHB4P54760 987 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 TTLL4Q14679 1199 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 CREB3L3Q68CJ9 461 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 SEPT14Q6ZU15 432 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 PIBF1Q8WXW3 757 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 PPP1R12CQ9BZL4 782 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 LY9Q9HBG7 655 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 POLR3EQ9NVU0 708 aa28.19■■■□□ 2.1
COPS9-203ENST00000489698 GRIN2DO15399 1336 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 EYSQ5T1H1 3165 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 OPLAHO14841 1288 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 MCM5P33992 734 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 STXBP2Q15833 593 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 BRDTQ58F21 947 aaPredicted RBP28.18■■■□□ 2.1
COPS9-203ENST00000489698 NFXL1Q6ZNB6 911 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 SLC43A3Q8NBI5 491 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 IWS1Q96ST2 819 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 MYL10Q9BUA6 226 aa28.18■■■□□ 2.1
COPS9-203ENST00000489698 CYTH3O43739 400 aa28.17■■■□□ 2.1
COPS9-203ENST00000489698 ARIH2O95376 493 aa28.17■■■□□ 2.1
COPS9-203ENST00000489698 ZNF654Q8IZM8 581 aa28.17■■■□□ 2.1
COPS9-203ENST00000489698 CDX2Q99626 313 aaPredicted RBP28.17■■■□□ 2.1
COPS9-203ENST00000489698 CD4P01730 458 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 HSD17B4P51659 736 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 TRAF1Q13077 416 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 NECTIN1Q15223 517 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 MFSD5Q6N075 450 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 CTCFLQ8NI51 663 aaPredicted RBP28.16■■■□□ 2.1
COPS9-203ENST00000489698 CCDC136Q96JN2 1154 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 RNPC3Q96LT9 517 aaKnown RBP28.16■■■□□ 2.1
COPS9-203ENST00000489698 PXMP2Q9NR77 195 aa28.16■■■□□ 2.1
COPS9-203ENST00000489698 PNMA6FA0A0J9YX94 578 aa28.15■■■□□ 2.1
COPS9-203ENST00000489698 CCDC69A6NI79 296 aa28.15■■■□□ 2.1
COPS9-203ENST00000489698 HOXA13P31271 388 aaPredicted RBP28.15■■■□□ 2.1
COPS9-203ENST00000489698 PURAQ00577 322 aaKnown RBP28.15■■■□□ 2.1
COPS9-203ENST00000489698 MTG1Q9BT17 334 aaPredicted RBP28.15■■■□□ 2.1
COPS9-203ENST00000489698 SEZ6LQ9BYH1 1024 aa28.15■■■□□ 2.1
COPS9-203ENST00000489698 TRPV6Q9H1D0 765 aa28.15■■■□□ 2.1
COPS9-203ENST00000489698 SEMA6BQ9H3T3 888 aa28.15■■■□□ 2.1
COPS9-203ENST00000489698 KIAA1217Q5T5P2 1943 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 SH2B2O14492 632 aaPredicted RBP28.14■■■□□ 2.1
COPS9-203ENST00000489698 DDAH1O94760 285 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 NR3C2P08235 984 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 COL9A3Q14050 684 aaPredicted RBP28.14■■■□□ 2.1
COPS9-203ENST00000489698 LY6KQ17RY6 165 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 TMEM87BQ96K49 555 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 MTA3Q9BTC8 594 aa28.14■■■□□ 2.1
COPS9-203ENST00000489698 VCANP13611 3396 aa28.14■■■□□ 2.09
COPS9-203ENST00000489698 B4GALT4O60513 344 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 MYCLP12524 364 aaPredicted RBP28.13■■■□□ 2.09
COPS9-203ENST00000489698 KIF5BP33176 963 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 CYP2C18P33260 490 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 CCDC62Q6P9F0 684 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 TMTC2Q8N394 836 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 TMEM199Q8N511 208 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 MAFAQ8NHW3 353 aaPredicted RBP28.13■■■□□ 2.09
COPS9-203ENST00000489698 LRRC2Q9BYS8 371 aa28.13■■■□□ 2.09
COPS9-203ENST00000489698 MAP3K20Q9NYL2 800 aaKnown RBP28.13■■■□□ 2.09
COPS9-203ENST00000489698 CDH23Q9H251 3354 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 A6NJR5 290 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 GCOM1H8Y6P7 765 aaPredicted RBP28.12■■■□□ 2.09
COPS9-203ENST00000489698 CDC45O75419 566 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 EIF3JO75822 258 aaKnown RBP28.12■■■□□ 2.09
COPS9-203ENST00000489698 POLR2MP0CAP2 368 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 CSF2RAP15509 400 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 SMAD3P84022 425 aaKnown RBP28.12■■■□□ 2.09
COPS9-203ENST00000489698 GHRHRQ02643 423 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 PPIGQ13427 754 aaKnown RBP eCLIP28.12■■■□□ 2.09
COPS9-203ENST00000489698 FAM47CQ5HY64 1035 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 RNF20Q5VTR2 975 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 FCHSD1Q86WN1 690 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 MAP3K14Q99558 947 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 HIPK3Q9H422 1215 aa28.12■■■□□ 2.09
COPS9-203ENST00000489698 KPNA6O60684 536 aa28.11■■■□□ 2.09
COPS9-203ENST00000489698 GH1P01241 217 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms