RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
GGPS1-207ENST00000489692 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
GGPS1-207ENST00000489692 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
GGPS1-207ENST00000489692 LAMA4Q16363 1823 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 KIAA0355O15063 1070 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 TMEM67Q5HYA8 995 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 CREB3L3Q68CJ9 461 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 DNERQ8NFT8 737 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 RNPC3Q96LT9 517 aaKnown RBP13.6□□□□□ -0.23
GGPS1-207ENST00000489692 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-207ENST00000489692 FAM161BQ96MY7 647 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
GGPS1-207ENST00000489692 ALDH8A1Q9H2A2 487 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-207ENST00000489692 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 DNAH12Q6ZR08 3092 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 PARP14Q460N5 1801 aa13.6□□□□□ -0.23
GGPS1-207ENST00000489692 LOC102724159A0A0B4J2E5 919 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 E7EWF7 191 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 CFBP00751 764 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 ITGB8P26012 769 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 PSMA5P28066 241 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 CPT1AP50416 773 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 PSMC6P62333 389 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 PWP2Q15269 919 aaKnown RBP13.59□□□□□ -0.23
GGPS1-207ENST00000489692 ARHGEF16Q5VV41 709 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 SCFD2Q8WU76 684 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-207ENST00000489692 CYP46A1Q9Y6A2 500 aa13.59□□□□□ -0.23
GGPS1-207ENST00000489692 SLC27A2O14975 620 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 CTAGE5O15320 804 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 BRD1O95696 1058 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TIMP1P01033 207 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.24
GGPS1-207ENST00000489692 EIF2AK2P19525 551 aaKnown RBP13.58□□□□□ -0.24
GGPS1-207ENST00000489692 AK2P54819 239 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 KRT32Q14532 448 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 SEC23AQ15436 765 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 FAM47CQ5HY64 1035 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 SYTL5Q8TDW5 730 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-207ENST00000489692 NSUN6Q8TEA1 469 aaKnown RBP13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 TAAR1Q96RJ0 339 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 RMDN3Q96TC7 470 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 POLR3EQ9NVU0 708 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 Q9Y3F1 56 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 PCDHA1Q9Y5I3 950 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 ALPK3Q96L96 1907 aa13.58□□□□□ -0.24
GGPS1-207ENST00000489692 ZBTB5O15062 677 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
GGPS1-207ENST00000489692 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
GGPS1-207ENST00000489692 CDK7P50613 346 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 EPHB4P54760 987 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 PPIGQ13427 754 aaKnown RBP eCLIP13.57□□□□□ -0.24
GGPS1-207ENST00000489692 KLHL40Q2TBA0 621 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 COPS5Q92905 334 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
GGPS1-207ENST00000489692 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 MAD2L2Q9UI95 211 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 TBX21Q9UL17 535 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-207ENST00000489692 TAF6LQ9Y6J9 622 aa13.57□□□□□ -0.24
GGPS1-207ENST00000489692 MYCLP12524 364 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-207ENST00000489692 PDIA4P13667 645 aaKnown RBP13.56□□□□□ -0.24
GGPS1-207ENST00000489692 NKX3-2P78367 333 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 TRAF1Q13077 416 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 GRM4Q14833 912 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 STXBP2Q15833 593 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 STOX1Q6ZVD7 989 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 FAM126BQ8IXS8 530 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 PIGSQ96S52 555 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 MTG1Q9BT17 334 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-207ENST00000489692 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
GGPS1-207ENST00000489692 FRMPD3Q5JV73 1810 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms