RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 TLL2Q9Y6L7 1015 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 NEMFO60524 1076 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 LIG1P18858 919 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 CIITAP33076 1130 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 COPB2P35606 906 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 FSIP1Q8NA03 581 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 ENGASEQ8NFI3 743 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 BRI3BPQ8WY22 251 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 SYAP1Q96A49 352 aaPredicted RBP16.08■□□□□ 0.16
VPS26A-205ENST00000489656 HHIPL1Q96JK4 782 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 BTBD7Q9P203 1132 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
VPS26A-205ENST00000489656 BTBD19C9JJ37 291 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 CNMDO75829 334 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 FAM160A1Q05DH4 1040 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 RGMBQ6NW40 437 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 ZCCHC17Q9NP64 241 aaKnown RBP16.07■□□□□ 0.16
VPS26A-205ENST00000489656 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
VPS26A-205ENST00000489656 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
VPS26A-205ENST00000489656 TDP2O95551 362 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 SLC10A3P09131 477 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 FSTL1Q12841 308 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 Q4G0T1 1027 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
VPS26A-205ENST00000489656 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 TMEM63CQ9P1W3 806 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 RBPJLQ9UBG7 517 aa16.06■□□□□ 0.16
VPS26A-205ENST00000489656 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
VPS26A-205ENST00000489656 PDHXO00330 501 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 SLC37A4O43826 429 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 NR1I2O75469 434 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 SLC25A27O95847 323 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 GRIN1Q05586 938 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 PLS1Q14651 629 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 IL17AQ16552 155 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 CALCRLQ16602 461 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
VPS26A-205ENST00000489656 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
VPS26A-205ENST00000489656 MCM3APO60318 1980 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 MGAMO43451 1857 aa16.05■□□□□ 0.16
VPS26A-205ENST00000489656 PFASO15067 1338 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 A0A1B0GVL5 298 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 TBX3O15119 743 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 PFKFB1P16118 471 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
VPS26A-205ENST00000489656 MKRN3Q13064 507 aaKnown RBP16.04■□□□□ 0.16
VPS26A-205ENST00000489656 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 CCDC102AQ96A19 550 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 LENG9Q96B70 501 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 AK8Q96MA6 479 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 MOV10L1Q9BXT6 1211 aaKnown RBP16.04■□□□□ 0.16
VPS26A-205ENST00000489656 KCNMB3Q9NPA1 279 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
VPS26A-205ENST00000489656 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS26A-205ENST00000489656 NDUFA8P51970 172 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 INHBEP58166 350 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 ERVK-24P63145 666 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 BAATQ14032 418 aaPredicted RBP16.03■□□□□ 0.16
VPS26A-205ENST00000489656 PCNX4Q63HM2 1172 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 XRRA1Q6P2D8 792 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 NSMFQ6X4W1 530 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 PARK7Q99497 189 aaKnown RBP16.03■□□□□ 0.16
VPS26A-205ENST00000489656 PTPN18Q99952 460 aa16.03■□□□□ 0.16
VPS26A-205ENST00000489656 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms