RNA–Protein interactions for RNA: ENST00000489595.6

PCBP4-213, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-213ENST00000489595 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
PCBP4-213ENST00000489595 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 OR6J1Q8NGC5 347 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 PABPC5Q96DU9 382 aaKnown RBP13.59□□□□□ -0.23
PCBP4-213ENST00000489595 IL1RAPL2Q9NP60 686 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 ARPP21Q9UBL0 812 aaPredicted RBP13.59□□□□□ -0.23
PCBP4-213ENST00000489595 MUTYHQ9UIF7 546 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 NOD1Q9Y239 953 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 TECTAO75443 2155 aa13.59□□□□□ -0.23
PCBP4-213ENST00000489595 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
PCBP4-213ENST00000489595 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
PCBP4-213ENST00000489595 NBNO60934 754 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 CXCL10P02778 98 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 ALAS1P13196 640 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 STAT2P52630 851 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 TCF15Q12870 199 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 STK11IPQ8N1F8 1099 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
PCBP4-213ENST00000489595 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 UPF3BQ9BZI7 483 aaKnown RBP13.58□□□□□ -0.24
PCBP4-213ENST00000489595 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
PCBP4-213ENST00000489595 ABHD14A-ACY1A0A1B0GW23 586 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 A6NJR5 290 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 SELPP16109 830 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 PTGISQ16647 500 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 PTPROQ16827 1216 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 FAM117BQ6P1L5 589 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 DHX38Q92620 1227 aaKnown RBP13.57□□□□□ -0.24
PCBP4-213ENST00000489595 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 MTMR4Q9NYA4 1195 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 CTNNA3Q9UI47 895 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 VPS13AQ96RL7 3174 aa13.57□□□□□ -0.24
PCBP4-213ENST00000489595 TRIP12Q14669 1992 aaPredicted RBP13.56□□□□□ -0.24
PCBP4-213ENST00000489595 GFRA3O60609 400 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 TTLL1O95922 423 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 ALDH5A1P51649 535 aaPredicted RBP13.56□□□□□ -0.24
PCBP4-213ENST00000489595 SNAP25P60880 206 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 RBL2Q08999 1139 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 BRDTQ58F21 947 aaPredicted RBP13.56□□□□□ -0.24
PCBP4-213ENST00000489595 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 EP400NLQ6ZTU2 488 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 BMP8AQ7Z5Y6 402 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
PCBP4-213ENST00000489595 RAD50Q92878 1312 aa13.56□□□□□ -0.24
PCBP4-213ENST00000489595 KPNA6O60684 536 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 EFCAB14O75071 495 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 PARNO95453 639 aaKnown RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 LTBRP36941 435 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 SMAD2Q15796 467 aaKnown RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 GDF6Q6KF10 455 aaPredicted RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 RNF135Q8IUD6 432 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 EDAQ92838 391 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 COPS5Q92905 334 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 ISY1Q9ULR0 285 aaKnown RBP13.55□□□□□ -0.24
PCBP4-213ENST00000489595 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
PCBP4-213ENST00000489595 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 PRDM1O75626 825 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 CKBP12277 381 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 PDE4AP27815 886 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 IKBKEQ14164 716 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 POP1Q99575 1024 aaKnown RBP13.54□□□□□ -0.24
PCBP4-213ENST00000489595 PRRX2Q99811 253 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
PCBP4-213ENST00000489595 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms