RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZGLP1P0C6A0 271 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 COL6A1P12109 1028 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 MYCLP1P12525 358 aaPredicted RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 ATF3P18847 181 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 TPP2P29144 1249 aaPredicted RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 RAB27AP51159 221 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 SSRP1Q08945 709 aaKnown RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 SEPT6Q14141 434 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 INPP5AQ14642 412 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 ZRSR2Q15696 482 aaKnown RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 TMEM95Q3KNT9 176 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 LRFN4Q6PJG9 635 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 HDXQ7Z353 690 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 HID1Q8IV36 788 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 AMOTL1Q8IY63 956 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 TCEAL8Q8IYN2 117 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 C19orf47Q8N9M1 422 aaKnown RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 PLCD4Q9BRC7 762 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 C19orf44Q9H6X5 657 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 DUSP13Q9UII6 198 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 FBXO9Q9UK97 447 aaPredicted RBP4.38□□□□□ -1.71
PRPF4-203ENST00000488937 MAPRE3Q9UPY8 281 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 TACC3Q9Y6A5 838 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 SNCAIPQ9Y6H5 919 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 E2F8A0AVK6 867 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PRAMEF27A3QJZ7 478 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 ADCY3O60266 1144 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 CD53P19397 219 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 CDK8P49336 464 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 GUCY2FP51841 1108 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 EGR3Q06889 387 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PABPC4Q13310 644 aaKnown RBP eCLIP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 MORC3Q14149 939 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 SLBPQ14493 270 aaKnown RBP eCLIP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 BRD3Q15059 726 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 MAP3K11Q16584 847 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 ZC3H12BQ5HYM0 836 aaKnown RBP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 SNAP47Q5SQN1 464 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 CPZQ66K79 652 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 MRM1Q6IN84 353 aaKnown RBP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 NECAB2Q7Z6G3 386 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 CHPFQ8IZ52 775 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 REXO1Q8N1G1 1221 aaKnown RBP4.37□□□□□ -1.71
PRPF4-203ENST00000488937 ANKS4BQ8N8V4 417 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PPM1EQ8WY54 764 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PLPPR2Q96GM1 343 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 C1QTNF3Q9BXJ4 246 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 WNT10AQ9GZT5 417 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 MIR1-1HGQ9H1L0 117 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 SP110Q9HB58 689 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 SIRT5Q9NXA8 310 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 SMPD4Q9NXE4 827 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 ZIM2Q9NZV7 527 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PFDN2Q9UHV9 154 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 GPR160Q9UJ42 338 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 PHLDB1Q86UU1 1377 aa4.37□□□□□ -1.71
PRPF4-203ENST00000488937 CCDC163A0A0D9SF12 145 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 A0A0U1RQG5 324 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 FAM221AA4D161 298 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 IRS4O14654 1257 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 CST3P01034 146 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 IMPDH2P12268 514 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 ETF1P62495 437 aaKnown RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 RPL6Q02878 288 aaKnown RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 PIN1Q13526 163 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 RAPGEF1Q13905 1077 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 VMACQ2NL98 169 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 GAB4Q2WGN9 574 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 SEZ6Q53EL9 994 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 WIPI1Q5MNZ9 446 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 FAM102BQ5T8I3 360 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 LARP1BQ659C4 914 aaKnown RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 IFNL3Q8IZI9 196 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 GPATCH11Q8N954 259 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 RIN3Q8TB24 985 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 RTFDC1Q9BY42 306 aaPredicted RBP4.36□□□□□ -1.71
PRPF4-203ENST00000488937 JADE2Q9NQC1 790 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 ANAPC4Q9UJX5 808 aa4.36□□□□□ -1.71
PRPF4-203ENST00000488937 CFAP69A5D8W1 941 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 UPK3BL1B0FP48 263 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 B2RBV5 119 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 UPK3BL2E5RIL1 263 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 RBAK-RBAKDNI3L0D1 243 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 N4BP3O15049 544 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 NRDCO43847 1150 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 KATNA1O75449 491 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 RFPL1O75677 317 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 F13A1P00488 732 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 FAM153BP0C7A2 387 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 LTKP29376 864 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 ZNF165P49910 485 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MTMR1Q13613 665 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MPP2Q14168 576 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 CBX2Q14781 532 aaPredicted RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MAPRE1Q15691 268 aaKnown RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 C21orf62-AS1Q17RA5 79 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 INO80DQ53TQ3 878 aaPredicted RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms