RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ARHGEF16Q5VV41 709 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 FAM109BQ6ICB4 259 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 SEPT14Q6ZU15 432 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 MAF1Q9H063 256 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 GPHNQ9NQX3 736 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 POLR3EQ9NVU0 708 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 B4GALT4O60513 344 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 ACRP10323 421 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 EIF2AK2P19525 551 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 PURAQ00577 322 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 TROAPQ12815 778 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■□□ 14.7
CCHCR1-215ENST00000488920 TTLL4Q14679 1199 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 STXBP2Q15833 593 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 LY6KQ17RY6 165 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 PIGSQ96S52 555 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 IWS1Q96ST2 819 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.196e-7■■■■■ 32.7
CCHCR1-215ENST00000488920 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 MTG1Q9BT17 334 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
CCHCR1-215ENST00000488920 LCTP09848 1927 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 A6NJR5 290 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 CYTH3O43739 400 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 HSD17B4P51659 736 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 SMAD3P84022 425 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 SEZ6LQ9BYH1 1024 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 TRMT13Q9NUP7 481 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 STXBP5LQ9Y2K9 1186 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 COL6A3P12111 3177 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 UMODL1Q5DID0 1318 aa13.86□□□□□ -0.19
CCHCR1-215ENST00000488920 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 PNMA6FA0A0J9YX94 578 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 SLC27A2O14975 620 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 PRC1O43663 620 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 KPNA6O60684 536 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 NR3C2P08235 984 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 CCL23P55773 120 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 CHMP4BP1P59074 171 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 NBPF20Q3BBV1 942 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 TMEM240Q5SV17 173 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 SLC17A8Q8NDX2 589 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 NOC4LQ9BVI4 516 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 LY9Q9HBG7 655 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
CCHCR1-215ENST00000488920 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 GH1P01241 217 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 CYP2C9P11712 490 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 MYCLP12524 364 aaPredicted RBP13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 GHRHRQ02643 423 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 ZNF654Q8IZM8 581 aa13.84□□□□□ -0.19
CCHCR1-215ENST00000488920 GCOM1H8Y6P7 765 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 SUPT20HL2P0C7V6 817 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 POLR2MP0CAP2 368 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 MCM5P33992 734 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 TRAF1Q13077 416 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 NECTIN1Q15223 517 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 ZFP91Q96JP5 570 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 PDCD2LQ9BRP1 358 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 TTYH1Q9H313 450 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
CCHCR1-215ENST00000488920 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms