RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
CCDC93-209ENST00000488908 SPRED1Q7Z699 444 aa5.14□□□□□ -1.59
CCDC93-209ENST00000488908 KYQ8NBH2 561 aa5.14□□□□□ -1.59
CCDC93-209ENST00000488908 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.14□□□□□ -1.59
CCDC93-209ENST00000488908 ZNF214Q9UL59 606 aaPredicted RBP5.14□□□□□ -1.59
CCDC93-209ENST00000488908 CBFA2T2O43439 604 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 PPP1R11O60927 126 aaPredicted RBP5.13□□□□□ -1.59
CCDC93-209ENST00000488908 SURF1Q15526 300 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 FBXW10Q5XX13 1052 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 MCTP2Q6DN12 878 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 CRIP3Q6Q6R5 217 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 USP51Q70EK9 711 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 LIMS2Q7Z4I7 341 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 CPNE8Q86YQ8 564 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 DCP2Q8IU60 420 aaKnown RBP5.13□□□□□ -1.59
CCDC93-209ENST00000488908 TTLL6Q8N841 843 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 ADCY4Q8NFM4 1077 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 CDK5RAP1Q96SZ6 601 aaKnown RBP5.13□□□□□ -1.59
CCDC93-209ENST00000488908 MCMBPQ9BTE3 642 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 GBP3Q9H0R5 595 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 BCL11AQ9H165 835 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 BACE2Q9Y5Z0 518 aa5.13□□□□□ -1.59
CCDC93-209ENST00000488908 NPHP3-ACAD11A0A0J9YXS1 232 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 C2orf71A6NGG8 1288 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 FZD7O75084 574 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 SLPIP03973 132 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 NTRK1P04629 796 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 PAMP19021 973 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 ACVRL1P37023 503 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 DPY19L1Q2PZI1 675 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 C9orf131Q5VYM1 1079 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 ZC3H18Q86VM9 953 aaKnown RBP5.12□□□□□ -1.59
CCDC93-209ENST00000488908 ZFPM1Q8IX07 1006 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 Q8N1X5 172 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 TXNDC5Q8NBS9 432 aaKnown RBP5.12□□□□□ -1.59
CCDC93-209ENST00000488908 RBBP8NLQ8NC74 664 aaPredicted RBP5.12□□□□□ -1.59
CCDC93-209ENST00000488908 LCORQ96JN0 433 aaPredicted RBP5.12□□□□□ -1.59
CCDC93-209ENST00000488908 HAUS7Q99871 368 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 MENTQ9BUN1 341 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 SLITRK6Q9H5Y7 841 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 SIT1Q9Y3P8 196 aa5.12□□□□□ -1.59
CCDC93-209ENST00000488908 LAMTOR5O43504 91 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 NPHS1O60500 1241 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 VAMP4O75379 141 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 FUCA1P04066 466 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 AMPD2Q01433 879 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 MRPL58Q14197 206 aaKnown RBP5.11□□□□□ -1.59
CCDC93-209ENST00000488908 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 PLEKHH3Q7Z736 793 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 AP5M1Q9H0R1 490 aa5.11□□□□□ -1.59
CCDC93-209ENST00000488908 C7orf72A4D263 438 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 DDX3XO00571 662 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC93-209ENST00000488908 PPM1BO75688 479 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 CDSNQ15517 529 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 HEATR6Q6AI08 1181 aaKnown RBP5.1□□□□□ -1.59
CCDC93-209ENST00000488908 RUFY4Q6ZNE9 571 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 ADAT2Q7Z6V5 191 aaKnown RBP5.1□□□□□ -1.59
CCDC93-209ENST00000488908 MIB1Q86YT6 1006 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 SYT3Q9BQG1 590 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 KLC2Q9H0B6 622 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 SLC12A7Q9Y666 1083 aa5.1□□□□□ -1.59
CCDC93-209ENST00000488908 ITGA1P56199 1179 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 GRB10Q13322 594 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 GNPTABQ3T906 1256 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 PRR31Q5SQ13 230 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 FAM26EQ8N5C1 309 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 ZNF747Q9BV97 191 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 KLHL25Q9H0H3 589 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 VPS11Q9H270 941 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 PPP4R1LQ9P1A2 415 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 CGGBP1Q9UFW8 167 aaPredicted RBP5.09□□□□□ -1.59
CCDC93-209ENST00000488908 PPT2Q9UMR5 302 aa5.09□□□□□ -1.59
CCDC93-209ENST00000488908 LTBP3Q9NS15 1303 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 B4GALT3O60512 393 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 CYP1A1P04798 512 aaPredicted RBP5.08□□□□□ -1.6
CCDC93-209ENST00000488908 ICAM4Q14773 271 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 ZNF326Q5BKZ1 582 aaKnown RBP5.08□□□□□ -1.6
CCDC93-209ENST00000488908 PRAMEF18Q5VWM3 479 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 STK32CQ86UX6 486 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 CIR1Q86X95 450 aaPredicted RBP5.08□□□□□ -1.6
CCDC93-209ENST00000488908 PLEKHO2Q8TD55 490 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 SEC14L1Q92503 715 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 PHAXQ9H814 394 aaKnown RBP5.08□□□□□ -1.6
CCDC93-209ENST00000488908 NGRNQ9NPE2 291 aaKnown RBP5.08□□□□□ -1.6
CCDC93-209ENST00000488908 MARCH2Q9P0N8 246 aa5.08□□□□□ -1.6
CCDC93-209ENST00000488908 SGSM2O43147 1006 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 EPHX1P07099 455 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 RCC1LQ96I51 464 aaKnown RBP5.07□□□□□ -1.6
CCDC93-209ENST00000488908 FGD4Q96M96 766 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 DEF6Q9H4E7 631 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 CD248Q9HCU0 757 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
CCDC93-209ENST00000488908 AMHP03971 560 aa5.06□□□□□ -1.6
CCDC93-209ENST00000488908 SLC6A11P48066 632 aa5.06□□□□□ -1.6
CCDC93-209ENST00000488908 SLC7A5Q01650 507 aa5.06□□□□□ -1.6
CCDC93-209ENST00000488908 KRTAP1-1Q07627 177 aa5.06□□□□□ -1.6
CCDC93-209ENST00000488908 CCDC27Q2M243 656 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms