RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 STK3Q13188 491 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 ACVR2BQ13705 512 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 PRAMEF19Q5SWL8 479 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 CPLX2Q6PUV4 134 aaKnown RBP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 HEATR3Q7Z4Q2 680 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 UBE2Q1Q7Z7E8 422 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 SHISA4Q96DD7 197 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 ZSCAN31Q96LW9 406 aaPredicted RBP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 TMEM106CQ9BVX2 250 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 ZMYND12Q9H0C1 365 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 GLT8D2Q9H1C3 349 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 PSTPIP2Q9H939 334 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 VTA1Q9NP79 307 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 RIC8AQ9NPQ8 531 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 OGDHLQ9ULD0 1010 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 MCM3APO60318 1980 aa10.21□□□□□ -0.78
SMKR1-202ENST00000488846 B4DLN1 442 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 CPLX1O14810 134 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 ST18O60284 1047 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 CDKL5O76039 1030 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 DEXIO95424 95 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 HOXA13P31271 388 aaPredicted RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 CLK2P49760 499 aaKnown RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 NKX3-2P78367 333 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 USP17L6PQ6QN14 398 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 TRIM22Q8IYM9 498 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 NSUN7Q8NE18 718 aaKnown RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 U2AF1L4Q8WU68 220 aaKnown RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 DEFB118Q96PH6 123 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 PDCD2LQ9BRP1 358 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 DDX20Q9UHI6 824 aaKnown RBP10.2□□□□□ -0.78
SMKR1-202ENST00000488846 CNPY2Q9Y2B0 182 aa10.2□□□□□ -0.78
SMKR1-202ENST00000488846 FRMPD3Q5JV73 1810 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 SMCO2A6NFE2 343 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 ADCY6O43306 1168 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 FOSP01100 380 aaPredicted RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 NR3C2P08235 984 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 FDPSP14324 419 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 AKR1A1P14550 325 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 MCM2P49736 904 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 NAPAP54920 295 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 AKAP17AQ02040 695 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 PGM5Q15124 567 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 STXBP2Q15833 593 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 CCDC144BQ3MJ40 725 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 VSIG10LQ86VR7 867 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 NECAB1Q8N987 351 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 ANKLE1Q8NAG6 615 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 CCDC12Q8WUD4 166 aaPredicted RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 CUL5Q93034 780 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 MPHOSPH6Q99547 160 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 LLPHQ9BRT6 129 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 FAM184BQ9ULE4 1060 aa10.19□□□□□ -0.78
SMKR1-202ENST00000488846 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 DDX49Q9Y6V7 483 aaKnown RBP10.19□□□□□ -0.78
SMKR1-202ENST00000488846 M0R2N6 131 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 DUSP11O75319 330 aaKnown RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 EIF3JO75822 258 aaKnown RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 STAM2O75886 525 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 MYCP01106 439 aaPredicted RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 EN2P19622 333 aaPredicted RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 ADCY7P51828 1080 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 PDE4DQ08499 809 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 AP3B2Q13367 1082 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 NPY5RQ15761 445 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 ARHGEF16Q5VV41 709 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 PCNX4Q63HM2 1172 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 MCTP2Q6DN12 878 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 IQSEC1Q6DN90 963 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 GALNT17Q6IS24 598 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 XRRA1Q6P2D8 792 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 DAGLBQ8NCG7 672 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
SMKR1-202ENST00000488846 Q9Y3F1 56 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
SMKR1-202ENST00000488846 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.17□□□□□ -0.78
SMKR1-202ENST00000488846 ADAMTS3O15072 1205 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 RGS20O76081 388 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 EIF2AK2P19525 551 aaKnown RBP10.17□□□□□ -0.78
SMKR1-202ENST00000488846 CST5P28325 142 aaPredicted RBP10.17□□□□□ -0.78
SMKR1-202ENST00000488846 CNGA1P29973 690 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 GNA11P29992 359 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 SOX10P56693 466 aa10.17□□□□□ -0.78
SMKR1-202ENST00000488846 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
SMKR1-202ENST00000488846 UBE2SQ16763 222 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms