RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 KRT71Q3SY84 523 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 LONP2Q86WA8 852 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 AP1M1Q9BXS5 423 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 SRPRBQ9Y5M8 271 aaKnown RBP17.84■□□□□ 0.45
MCF2L-229ENST00000488765 A6NNZ2 444 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
MCF2L-229ENST00000488765 EHHADHQ08426 723 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TUBB8Q3ZCM7 444 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TAX1BP1Q86VP1 789 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 PCDHGC5Q9Y5F6 944 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 ITIH6Q6UXX5 1313 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 GPAA1O43292 621 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 RAD51CO43502 376 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 FECHP22830 423 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 CTDSPL2Q05D32 466 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 TAF11Q15544 211 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 SPATA20Q8TB22 786 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 CAVIN3Q969G5 261 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 EBF2Q9HAK2 575 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 NOP53Q9NZM5 478 aaKnown RBP17.83■□□□□ 0.45
MCF2L-229ENST00000488765 PCDHA13Q9Y5I0 950 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.45
MCF2L-229ENST00000488765 HMGB1P1B2RPK0 211 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-229ENST00000488765 PPIP5K2O43314 1243 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 CDKL5O76039 1030 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 ATP4AP20648 1035 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 SCNN1BP51168 640 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-229ENST00000488765 MXRA7P84157 204 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 GFPT1Q06210 699 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-229ENST00000488765 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 MTRQ99707 1265 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 TMBIM4Q9HC24 238 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 TBC1D2BQ9UPU7 963 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 CCT8L1PA6NM43 557 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 MMP1P03956 469 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 EIF4A3P38919 411 aaKnown RBP17.83■□□□□ 0.44
MCF2L-229ENST00000488765 NTRK3Q16288 839 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 TSGA10Q9BZW7 698 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 MLXIPLQ9NP71 852 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 ABCF2Q9UG63 623 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 PNMA2Q9UL42 364 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 HYOU1Q9Y4L1 999 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.44
MCF2L-229ENST00000488765 USO1O60763 962 aaKnown RBP17.82■□□□□ 0.44
MCF2L-229ENST00000488765 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-229ENST00000488765 IFFO1Q0D2I5 559 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 DRP2Q13474 957 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 GLE1Q53GS7 698 aaKnown RBP17.82■□□□□ 0.44
MCF2L-229ENST00000488765 B4GALNT2Q8NHY0 566 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 EPAS1Q99814 870 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 TLR10Q9BXR5 811 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 NCAPD2Q15021 1401 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 BAZ2BQ9UIF8 2168 aaKnown RBP17.82■□□□□ 0.44
MCF2L-229ENST00000488765 XDHP47989 1333 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 EPHB6O15197 1021 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 CCDC178Q5BJE1 867 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 DNAJC7Q99615 494 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 SLC12A6Q9UHW9 1150 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 CAPN11Q9UMQ6 739 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 MST1RQ04912 1400 aa17.82■□□□□ 0.44
MCF2L-229ENST00000488765 NEFHP12036 1026 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 KCNQ4P56696 695 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ANKRD20A2Q5SQ80 823 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ANKRD20A1Q5TYW2 823 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ANKRD20A3Q5VUR7 823 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 PPP4R3AQ6IN85 833 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-229ENST00000488765 MGARPQ8TDB4 240 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 NEUROG2Q9H2A3 272 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 COPRSQ9NQ92 184 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ZMYND8Q9ULU4 1186 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-229ENST00000488765 RASSF10A6NK89 507 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ZAP70P43403 619 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 CCDC197Q8NCU1 140 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 EZH1Q92800 747 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-229ENST00000488765 FBXL5Q9UKA1 691 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 H0Y3Z8 333 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
MCF2L-229ENST00000488765 PPP2R2AP63151 447 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 UAP1Q16222 522 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-229ENST00000488765 HPS3Q969F9 1004 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 GSDMAQ96QA5 445 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 PAGR1Q9BTK6 254 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 DPH5Q9H2P9 285 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 BATF3Q9NR55 127 aa17.81■□□□□ 0.44
MCF2L-229ENST00000488765 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 PYGBP11216 843 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 PCK1P35558 622 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms