RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CARFQ8N187 725 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 NOX5Q96PH1 765 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 CRBNQ96SW2 442 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 SPATA6Q9NWH7 488 aaPredicted RBP5.07□□□□□ -1.6
CD46-215ENST00000488596 DIS3Q9Y2L1 958 aaKnown RBP5.07□□□□□ -1.6
CD46-215ENST00000488596 RWDD3Q9Y3V2 267 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 AURKAO14965 403 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 VAMP4O75379 141 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 CNR2P34972 360 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 EIF6P56537 245 aaKnown RBP5.06□□□□□ -1.6
CD46-215ENST00000488596 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 ADCY4Q8NFM4 1077 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 SMARCC2Q8TAQ2 1214 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 TSPAN17Q96FV3 270 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 SHDQ96IW2 340 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 DNAJC2Q99543 621 aaKnown RBP5.06□□□□□ -1.6
CD46-215ENST00000488596 ZNF408Q9H9D4 720 aa5.06□□□□□ -1.6
CD46-215ENST00000488596 STXBP3O00186 592 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 AKAP8O43823 692 aaKnown RBP5.05□□□□□ -1.6
CD46-215ENST00000488596 STK10O94804 968 aaKnown RBP5.05□□□□□ -1.6
CD46-215ENST00000488596 GIPRP48546 466 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 TCEAL1Q15170 157 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 EEF1DP3Q658K8 133 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 CPNE8Q86YQ8 564 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 FAM169BQ8N8A8 192 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 GPR20Q99678 358 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 MTA3Q9BTC8 594 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 LNPKQ9C0E8 428 aa5.05□□□□□ -1.6
CD46-215ENST00000488596 SMAD7O15105 426 aaKnown RBP5.04□□□□□ -1.6
CD46-215ENST00000488596 MAGEA10P43363 369 aaPredicted RBP5.04□□□□□ -1.6
CD46-215ENST00000488596 PPP2R5EQ16537 467 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 ZNF761Q86XN6 746 aaPredicted RBP5.04□□□□□ -1.6
CD46-215ENST00000488596 LZTR1Q8N653 840 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 CPA5Q8WXQ8 436 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 RBM15Q96T37 977 aaKnown RBP eCLIP5.04□□□□□ -1.6
CD46-215ENST00000488596 HAUS7Q99871 368 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 WHRNQ9P202 907 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 GULP1Q9UBP9 304 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 PALD1Q9ULE6 856 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 STRIP2Q9ULQ0 834 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 PCDHB10Q9UN67 800 aa5.04□□□□□ -1.6
CD46-215ENST00000488596 ITGB3P05106 788 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 SARSP49591 514 aaKnown RBP5.03□□□□□ -1.6
CD46-215ENST00000488596 GJA9P57773 515 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 CACNB2Q08289 660 aaPredicted RBP5.03□□□□□ -1.6
CD46-215ENST00000488596 RBL2Q08999 1139 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 ANKS3Q6ZW76 656 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 CABP7Q86V35 215 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 NETO2Q8NC67 525 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 UBXN4Q92575 508 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 ZBTB8AQ96BR9 441 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 PEX11GQ96HA9 241 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 FGD4Q96M96 766 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 SYT3Q9BQG1 590 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 KLHL25Q9H0H3 589 aa5.03□□□□□ -1.6
CD46-215ENST00000488596 C2orf71A6NGG8 1288 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 EPHX1P07099 455 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 ADAM17P78536 824 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 SMAD4Q13485 552 aaKnown RBP5.02□□□□□ -1.61
CD46-215ENST00000488596 SLC9A5Q14940 896 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 ADAT2Q7Z6V5 191 aaKnown RBP5.02□□□□□ -1.61
CD46-215ENST00000488596 LINC00482Q8N8I6 264 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 HNRNPLLQ8WVV9 542 aaKnown RBP5.02□□□□□ -1.61
CD46-215ENST00000488596 NTMQ9P121 344 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 PRKAG3Q9UGI9 489 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 NUDT5Q9UKK9 219 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 SIT1Q9Y3P8 196 aa5.02□□□□□ -1.61
CD46-215ENST00000488596 A0A1W2PQH9 124 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 C7orf72A4D263 438 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 OVOL3O00110 214 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 NTRK1P04629 796 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 SEPHS1P49903 392 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 HEATR6Q6AI08 1181 aaKnown RBP5.01□□□□□ -1.61
CD46-215ENST00000488596 ADAMTS17Q8TE56 1095 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 GORASP1Q9BQQ3 440 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 ST7Q9NRC1 585 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 SMPD4Q9NXE4 827 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 CGGBP1Q9UFW8 167 aaPredicted RBP5.01□□□□□ -1.61
CD46-215ENST00000488596 BACE2Q9Y5Z0 518 aa5.01□□□□□ -1.61
CD46-215ENST00000488596 KLF4O43474 513 aa5□□□□□ -1.61
CD46-215ENST00000488596 ZBTB7AO95365 584 aa5□□□□□ -1.61
CD46-215ENST00000488596 C8BP07358 591 aa5□□□□□ -1.61
CD46-215ENST00000488596 TNFRSF1AP19438 455 aa5□□□□□ -1.61
CD46-215ENST00000488596 ZXDAP98168 799 aa5□□□□□ -1.61
CD46-215ENST00000488596 WWC2Q6AWC2 1192 aa5□□□□□ -1.61
CD46-215ENST00000488596 TTLL7Q6ZT98 887 aa5□□□□□ -1.61
CD46-215ENST00000488596 CKAP2LQ8IYA6 745 aa5□□□□□ -1.61
CD46-215ENST00000488596 ARHGEF39Q8N4T4 335 aa5□□□□□ -1.61
CD46-215ENST00000488596 OR6P1Q8NGX9 317 aa5□□□□□ -1.61
CD46-215ENST00000488596 MICAL1Q8TDZ2 1067 aa5□□□□□ -1.61
CD46-215ENST00000488596 USP33Q8TEY7 942 aa5□□□□□ -1.61
CD46-215ENST00000488596 KLHL6Q8WZ60 621 aa5□□□□□ -1.61
CD46-215ENST00000488596 HIRIP3Q9BW71 556 aaPredicted RBP5□□□□□ -1.61
CD46-215ENST00000488596 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
CD46-215ENST00000488596 GBP3Q9H0R5 595 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms