RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SNHG28P0DPA3 235 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 BFSP2Q13515 415 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 ANKRD45Q5TZF3 282 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 MICALL1Q8N3F8 863 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 GBF1Q92538 1859 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 TXNP10599 105 aaKnown RBP22.38■■□□□ 1.17
GGPS1-206ENST00000488594 HSPD1P10809 573 aaKnown RBP22.38■■□□□ 1.17
GGPS1-206ENST00000488594 GPATCH4Q5T3I0 446 aaKnown RBP22.38■■□□□ 1.17
GGPS1-206ENST00000488594 RGS22Q8NE09 1264 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 NOD1Q9Y239 953 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 PDE1AP54750 535 aa22.37■■□□□ 1.17
GGPS1-206ENST00000488594 MFSD6Q6ZSS7 791 aa22.37■■□□□ 1.17
GGPS1-206ENST00000488594 FAM227BQ96M60 508 aa22.37■■□□□ 1.17
GGPS1-206ENST00000488594 SCN10AQ9Y5Y9 1956 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 A0A0D9SFI3 127 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 KIF28PB7ZC32 967 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 BAIAP3O94812 1187 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 NT5C2P49902 561 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 SKIV2LQ15477 1246 aaKnown RBP22.36■■□□□ 1.17
GGPS1-206ENST00000488594 CCDC155Q8N6L0 562 aa22.36■■□□□ 1.17
GGPS1-206ENST00000488594 FTOQ9C0B1 505 aaKnown RBP eCLIP22.36■■□□□ 1.17
GGPS1-206ENST00000488594 RNF41Q9H4P4 317 aaPredicted RBP22.36■■□□□ 1.17
GGPS1-206ENST00000488594 CHD7Q9P2D1 2997 aa22.35■■□□□ 1.17
GGPS1-206ENST00000488594 BMP1P13497 986 aa22.35■■□□□ 1.17
GGPS1-206ENST00000488594 HERC6Q8IVU3 1022 aa22.35■■□□□ 1.17
GGPS1-206ENST00000488594 COPS5Q92905 334 aa22.35■■□□□ 1.17
GGPS1-206ENST00000488594 MTCH2Q9Y6C9 303 aa22.35■■□□□ 1.17
GGPS1-206ENST00000488594 HAND2P61296 217 aa22.34■■□□□ 1.17
GGPS1-206ENST00000488594 CAGE1Q8TC20 777 aa22.34■■□□□ 1.17
GGPS1-206ENST00000488594 ESR2Q92731 530 aa22.34■■□□□ 1.17
GGPS1-206ENST00000488594 NCOR1O75376 2440 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 CCDC171Q6TFL3 1326 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 MFAP1P55081 439 aaKnown RBP22.33■■□□□ 1.17
GGPS1-206ENST00000488594 USH1GQ495M9 461 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 ZNF589Q86UQ0 364 aaPredicted RBP22.33■■□□□ 1.17
GGPS1-206ENST00000488594 SESTD1Q86VW0 696 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 DGKHQ86XP1 1220 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 COG5Q9UP83 839 aa22.33■■□□□ 1.17
GGPS1-206ENST00000488594 TFF2Q03403 129 aa22.32■■□□□ 1.16
GGPS1-206ENST00000488594 TAP1Q03518 808 aa22.32■■□□□ 1.16
GGPS1-206ENST00000488594 PTGISQ16647 500 aa22.32■■□□□ 1.16
GGPS1-206ENST00000488594 CCDC62Q6P9F0 684 aa22.32■■□□□ 1.16
GGPS1-206ENST00000488594 AFAP1L1Q8TED9 768 aa22.32■■□□□ 1.16
GGPS1-206ENST00000488594 RFXAPO00287 272 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 ARIH2O95376 493 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 PARNO95453 639 aaKnown RBP22.31■■□□□ 1.16
GGPS1-206ENST00000488594 GH1P01241 217 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 NMIQ13287 307 aaPredicted RBP22.31■■□□□ 1.16
GGPS1-206ENST00000488594 CCDC178Q5BJE1 867 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 MCF2L2Q86YR7 1114 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 TBC1D10CQ8IV04 446 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 NSUN6Q8TEA1 469 aaKnown RBP22.31■■□□□ 1.16
GGPS1-206ENST00000488594 AFG1LQ8WV93 481 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 ARNTL2Q8WYA1 636 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 IWS1Q96ST2 819 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 C1QTNF1Q9BXJ1 281 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 ABCB11O95342 1321 aa22.31■■□□□ 1.16
GGPS1-206ENST00000488594 MMP3P08254 477 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 GOLGA8HP0CJ92 632 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 CASTP20810 708 aaKnown RBP22.3■■□□□ 1.16
GGPS1-206ENST00000488594 KCNJ6P48051 423 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 CHMP4BP1P59074 171 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 HDAC1Q13547 482 aaPredicted RBP22.3■■□□□ 1.16
GGPS1-206ENST00000488594 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
GGPS1-206ENST00000488594 IQCA1Q86XH1 822 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 PPP1R13LQ8WUF5 828 aa22.3■■□□□ 1.16
GGPS1-206ENST00000488594 EPOPA6NHQ4 379 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 TLL1O43897 1013 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 KCNQ1P51787 676 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 STXBP2Q15833 593 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 NECAB3Q96P71 396 aaPredicted RBP22.29■■□□□ 1.16
GGPS1-206ENST00000488594 UBA5Q9GZZ9 404 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 TANC1Q9C0D5 1861 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 SCN5AQ14524 2016 aa22.29■■□□□ 1.16
GGPS1-206ENST00000488594 TRIM6-TRIM34B2RNG4 842 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 ZNF213O14771 459 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 SELPP16109 830 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 ARHGAP1Q07960 439 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 RBL2Q08999 1139 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 SEPT14Q6ZU15 432 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 LRRC8DQ7L1W4 858 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 SYTL5Q8TDW5 730 aaPredicted RBP22.28■■□□□ 1.16
GGPS1-206ENST00000488594 NEDD4P46934 1319 aa22.28■■□□□ 1.16
GGPS1-206ENST00000488594 DGKDQ16760 1214 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 LY6KQ17RY6 165 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 ASPRV1Q53RT3 343 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 GDF6Q6KF10 455 aaPredicted RBP22.27■■□□□ 1.16
GGPS1-206ENST00000488594 CTAGE1Q96RT6 745 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 RMDN3Q96TC7 470 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 ZKSCAN3Q9BRR0 538 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 KAT14Q9H8E8 782 aa22.27■■□□□ 1.16
GGPS1-206ENST00000488594 PRRC2BQ5JSZ5 2229 aaKnown RBP22.27■■□□□ 1.16
GGPS1-206ENST00000488594 ARHGEF15O94989 841 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
GGPS1-206ENST00000488594 WDR5P61964 334 aaKnown RBP22.26■■□□□ 1.15
GGPS1-206ENST00000488594 CNKSR3Q6P9H4 555 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 ADGRF4Q8IZF3 695 aa22.26■■□□□ 1.15
GGPS1-206ENST00000488594 ANKS1AQ92625 1134 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms