RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FUCA1P04066 466 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 C6orf222P0C671 652 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 BCL6P41182 706 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 GTF2A2P52657 109 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 CORO7P57737 925 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 GABREP78334 506 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 TCEA2Q15560 299 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 TESK1Q15569 626 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 BICRALQ6AI39 1079 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 RSPO2Q6UXX9 243 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 MAMDC2Q7Z304 686 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 MTDHQ86UE4 582 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 NLGN1Q8N2Q7 840 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 LZTR1Q8N653 840 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 ASIC4Q96FT7 647 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 NCOA5Q9HCD5 579 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 PDLIM7Q9NR12 457 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 NPFFR2Q9Y5X5 522 aa5.64□□□□□ -1.51
ECHDC1-217ENST00000488087 AQP7O14520 342 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 PPP1R12AO14974 1030 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 CLSTN1O94985 981 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 PAPLNO95428 1278 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 EFEMP2O95967 443 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 GLI1P08151 1106 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 PNLIPP16233 465 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 GPR85P60893 370 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 MVKQ03426 396 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 LSAMPQ13449 338 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 MPZL3Q6UWV2 235 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 CABP7Q86V35 215 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 TEX2Q8IWB9 1127 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 SYNPOQ8N3V7 929 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 NLGN2Q8NFZ4 835 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 FAM168AQ92567 244 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 TRMT2BQ96GJ1 504 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 TMEM169Q96HH4 297 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 ZFYVE21Q9BQ24 234 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 CRTAC1Q9NQ79 661 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
ECHDC1-217ENST00000488087 C22orf46C9J442 243 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 ENPP3O14638 875 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 PLD2O14939 933 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 MSCO60682 206 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 EFCAB14O75071 495 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 JUNBP17275 347 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 FPR2P25090 351 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 PDE6BP35913 854 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 GUCY1A3Q02108 690 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 CBX2Q14781 532 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 KIZQ2M2Z5 673 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 CEP68Q76N32 757 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 DPF3Q92784 378 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 SHISA4Q96DD7 197 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 ALG1Q9BT22 464 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 SLC6A17Q9H1V8 727 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 SLC52A2Q9HAB3 445 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 COA3Q9Y2R0 106 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 YBX2Q9Y2T7 364 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-217ENST00000488087 PPP1R11O60927 126 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 ITGB5P18084 799 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 NAT1P18440 290 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 SDHBP21912 280 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 TKFCQ3LXA3 575 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 TAF7LQ5H9L4 462 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 LBX2Q6XYB7 198 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 SLC7A14Q8TBB6 771 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 INTS4Q96HW7 963 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 MAGEB10Q96LZ2 347 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 FEZ1Q99689 392 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 SLKQ9H2G2 1235 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 FBXL7Q9UJT9 491 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 CD2APQ9Y5K6 639 aa5.61□□□□□ -1.51
ECHDC1-217ENST00000488087 OR14I1A6ND48 311 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 NUDT19A8MXV4 375 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 CRTAMO95727 393 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 MPOP05164 745 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 HSD3B2P26439 372 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 FNDC3BQ53EP0 1204 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 TRIM61Q5EBN2 209 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 NLRP10Q86W26 655 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 MTA3Q9BTC8 594 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 DBR1Q9UK59 544 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 PCDHA8Q9Y5H6 950 aa5.6□□□□□ -1.51
ECHDC1-217ENST00000488087 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 H7BY64 318 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 SOD2P04179 222 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms