RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 CCSAPQ6IQ19 270 aaPredicted RBP19.71■□□□□ 0.75
HMG20B-212ENST00000487894 CCDC82Q8N4S0 544 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 SAMD3Q8N6K7 520 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
HMG20B-212ENST00000487894 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 PXMP2Q9NR77 195 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 MAP3K20Q9NYL2 800 aaKnown RBP19.71■□□□□ 0.75
HMG20B-212ENST00000487894 PCDH10Q9P2E7 1040 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 NR2E3Q9Y5X4 410 aa19.71■□□□□ 0.75
HMG20B-212ENST00000487894 A0A1W2PQ45 241 aaPredicted RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 A0A1W2PQY0 241 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 B4DLN1 442 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 C6orf222P0C671 652 aaPredicted RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 EIF2AK2P19525 551 aaKnown RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 HOXA13P31271 388 aaPredicted RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 MRPL12P52815 198 aaKnown RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 ATN1P54259 1190 aaPredicted RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 NKX3-2P78367 333 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 FUT2Q10981 343 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 IQSEC1Q6DN90 963 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 RUFY3Q7L099 469 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 TLK2Q86UE8 772 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 FERMT2Q96AC1 680 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 TSEN34Q9BSV6 310 aaKnown RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 ZSWIM6Q9HCJ5 1215 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 FAM217BQ9NTX9 383 aaPredicted RBP19.7■□□□□ 0.74
HMG20B-212ENST00000487894 DOCK5Q9H7D0 1870 aa19.7■□□□□ 0.74
HMG20B-212ENST00000487894 CDC27P30260 824 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 ACLYP53396 1101 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 SNX17Q15036 470 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 ARHGEF16Q5VV41 709 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 SLC39A5Q6ZMH5 540 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 IWS1Q96ST2 819 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 TM6SF1Q9BZW5 370 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 SPC25Q9HBM1 224 aa19.69■□□□□ 0.74
HMG20B-212ENST00000487894 MOXD2PA6NHM9 499 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 GCOM1H8Y6P7 765 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-212ENST00000487894 POLR2MP0CAP2 368 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 METAP2P50579 478 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMG20B-212ENST00000487894 RTP1P59025 263 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 KCNA10Q16322 511 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 DUSP28Q4G0W2 176 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
HMG20B-212ENST00000487894 WDR11Q9BZH6 1224 aa19.68■□□□□ 0.74
HMG20B-212ENST00000487894 NAP1L2Q9ULW6 460 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-212ENST00000487894 BEX3Q00994 111 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 TOB2Q14106 344 aaPredicted RBP19.67■□□□□ 0.74
HMG20B-212ENST00000487894 SCFD2Q8WU76 684 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 PDCD2LQ9BRP1 358 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
HMG20B-212ENST00000487894 Q9Y3F1 56 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 CYP46A1Q9Y6A2 500 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 FRMPD4Q14CM0 1322 aa19.67■□□□□ 0.74
HMG20B-212ENST00000487894 RANBP2P49792 3224 aaKnown RBP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 DYNC1LI2O43237 492 aaPredicted RBP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 ARIH2O95376 493 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 ASGR1P07306 291 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 NR3C2P08235 984 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 ADD1P35611 737 aaKnown RBP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 EVCP57679 992 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 PGM5Q15124 567 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 PPP2R5BQ15173 497 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 STXBP2Q15833 593 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 GNASQ5JWF2 1037 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 C1orf53Q5VUE5 145 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 FCHSD1Q86WN1 690 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 PCSK9Q8NBP7 692 aaKnown RBP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 IL31RAQ8NI17 732 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 GPKOWQ92917 476 aaPredicted RBP eCLIP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 AP5M1Q9H0R1 490 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 ZMYND8Q9ULU4 1186 aaPredicted RBP19.66■□□□□ 0.74
HMG20B-212ENST00000487894 SCN10AQ9Y5Y9 1956 aa19.66■□□□□ 0.74
HMG20B-212ENST00000487894 MEIS2O14770 477 aa19.65■□□□□ 0.74
HMG20B-212ENST00000487894 FSCN1Q16658 493 aaKnown RBP19.65■□□□□ 0.74
HMG20B-212ENST00000487894 TRIM60Q495X7 471 aa19.65■□□□□ 0.74
HMG20B-212ENST00000487894 WWC2Q6AWC2 1192 aa19.65■□□□□ 0.74
HMG20B-212ENST00000487894 ATP11BQ9Y2G3 1177 aa19.65■□□□□ 0.74
HMG20B-212ENST00000487894 PIK3CDO00329 1044 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 NKRFO15226 690 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMG20B-212ENST00000487894 SEC24BO95487 1268 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 SYN1P17600 705 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 ANAPC15P60006 121 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 TTLL4Q14679 1199 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 CCDC62Q6P9F0 684 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 USP17L6PQ6QN14 398 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 HEATR3Q7Z4Q2 680 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 COPS5Q92905 334 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 STARD7Q9NQZ5 370 aa19.64■□□□□ 0.73
HMG20B-212ENST00000487894 CCDC196A0A1B0GTZ2 297 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 EIF3JO75822 258 aaKnown RBP19.63■□□□□ 0.73
HMG20B-212ENST00000487894 RGS20O76081 388 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 TXNP10599 105 aaKnown RBP19.63■□□□□ 0.73
HMG20B-212ENST00000487894 MYCLP12524 364 aaPredicted RBP19.63■□□□□ 0.73
HMG20B-212ENST00000487894 PDIA3P30101 505 aaKnown RBP19.63■□□□□ 0.73
HMG20B-212ENST00000487894 TYW1BQ6NUM6 668 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 SEPT14Q6ZU15 432 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 VSIG10LQ86VR7 867 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 OR6J1Q8NGC5 347 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms