RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SYTL5Q8TDW5 730 aaPredicted RBP10.78□□□□□ -0.68
LCN2-205ENST00000487719 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 FGD4Q96M96 766 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
LCN2-205ENST00000487719 PSTPIP2Q9H939 334 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 Q9Y3F1 56 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 MYH9P35579 1960 aaKnown RBP10.77□□□□□ -0.68
LCN2-205ENST00000487719 SPDYE3A6NKU9 549 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 STAM2O75886 525 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 CDKL5O76039 1030 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 EIF2AK2P19525 551 aaKnown RBP10.77□□□□□ -0.69
LCN2-205ENST00000487719 CCND2P30279 289 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 ADCYAP1R1P41586 468 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 CPT1AP50416 773 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 NAPAP54920 295 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 GHRHRQ02643 423 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 GNASQ5JWF2 1037 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 FCHSD1Q86WN1 690 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 WDR11Q9BZH6 1224 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 UPF3BQ9BZI7 483 aaKnown RBP10.77□□□□□ -0.69
LCN2-205ENST00000487719 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 CNTNAP5Q8WYK1 1306 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 NID2Q14112 1375 aa10.77□□□□□ -0.69
LCN2-205ENST00000487719 PPP1R11O60927 126 aaPredicted RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 EIF3JO75822 258 aaKnown RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 CABYRO75952 493 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 NR3C2P08235 984 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 EDNRBP24530 442 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 CST5P28325 142 aaPredicted RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 HOXA13P31271 388 aaPredicted RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 GJA9P57773 515 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 FSCN1Q16658 493 aaKnown RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 C7orf61Q8IZ16 206 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 CMTR1Q8N1G2 835 aaKnown RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 ZNF274Q96GC6 653 aaPredicted RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
LCN2-205ENST00000487719 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 STARD7Q9NQZ5 370 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 PHF24Q9UPV7 400 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 DNAH12Q6ZR08 3092 aa10.76□□□□□ -0.69
LCN2-205ENST00000487719 PIK3CDO00329 1044 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 DYNC1LI2O43237 492 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 ADAMTS4O75173 837 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 TXNP10599 105 aaKnown RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 COL6A1P12109 1028 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 ADCY7P51828 1080 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 XRRA1Q6P2D8 792 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 SEPT14Q6ZU15 432 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 OR6J1Q8NGC5 347 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
LCN2-205ENST00000487719 LENG1Q96BZ8 264 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 RNF26Q9BY78 433 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 KATNBL1Q9H079 304 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 UPF3AQ9H1J1 476 aaKnown RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 MRVI1Q9Y6F6 885 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
LCN2-205ENST00000487719 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 ASTN1O14525 1302 aa10.75□□□□□ -0.69
LCN2-205ENST00000487719 TRIP12Q14669 1992 aaPredicted RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 A0A1W2PQ45 241 aaPredicted RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 A0A1W2PQY0 241 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 hCG_1642624A0A1W2PR95 340 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 KPNA6O60684 536 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 GH1P01241 217 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 ASGR1P07306 291 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 SCG2P13521 617 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 SMPD1P17405 629 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 XBP1P17861 261 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 GNA11P29992 359 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 ACLYP53396 1101 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 EVCP57679 992 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
LCN2-205ENST00000487719 PGM5Q15124 567 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 KCNA10Q16322 511 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 TAPT1Q6NXT6 567 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 TBC1D5Q92609 795 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 FERMT2Q96AC1 680 aa10.74□□□□□ -0.69
LCN2-205ENST00000487719 CDHR1Q96JP9 859 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms