RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 AK8Q96MA6 479 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 RUFY1Q96T51 708 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 NDST4Q9H3R1 872 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 MAGEF1Q9HAY2 307 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
ZNF3-215ENST00000487620 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 DYMQ7RTS9 669 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 EFCAB13Q8IY85 973 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 SLC44A5Q8NCS7 719 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 BCAS4Q8TDM0 211 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 HYOU1Q9Y4L1 999 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 BUB1O43683 1085 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 DNA2P51530 1060 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 GNGT1P63211 74 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 PPFIA1Q13136 1202 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 NONOQ15233 471 aaKnown RBP eCLIP10.86□□□□□ -0.67
ZNF3-215ENST00000487620 GALNT17Q6IS24 598 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 MICALL1Q8N3F8 863 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 STIM2Q9P246 746 aa10.86□□□□□ -0.67
ZNF3-215ENST00000487620 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 EBAG9O00559 213 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TCP1P17987 556 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 PPP1R2P41236 205 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TXKP42681 527 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 PAFAH1B1P43034 410 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 MAGEA1P43355 309 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 EPHB4P54760 987 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 RASSF7Q02833 373 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 ZNF444Q8N0Y2 327 aaPredicted RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TSEN2Q8NCE0 465 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TANGO6Q9C0B7 1094 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SIK3Q9Y2K2 1263 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 GOLGA8KD6RF30 607 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 OPA1O60313 960 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 HSF2BPO75031 334 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SF3B3Q15393 1217 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TDRD12Q587J7 1177 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 HAUS3Q68CZ6 603 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SV2BQ7L1I2 683 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 TADA2BQ86TJ2 420 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 IPO4Q8TEX9 1081 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
ZNF3-215ENST00000487620 RBM12Q9NTZ6 932 aaKnown RBP10.85□□□□□ -0.67
ZNF3-215ENST00000487620 SHTN1A0MZ66 631 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 PRLRP16471 622 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 HNRNPH3P31942 346 aaKnown RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 MAN2A1Q16706 1144 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 CENPPQ6IPU0 288 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 CCDC24Q8N4L8 307 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 TBCKQ8TEA7 893 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 SH3RF3Q8TEJ3 882 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 ARL8AQ96BM9 186 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 TMEM47Q9BQJ4 181 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 MMTAG2Q9BU76 263 aaKnown RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 ZPR1O75312 459 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 LIG3P49916 1009 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 ITIH3Q06033 890 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 KCTD16Q68DU8 428 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 TMED8Q6PL24 325 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 TMC4Q7Z404 712 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 IQCDQ96DY2 449 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 MTMR8Q96EF0 704 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 CDK5RAP3Q96JB5 506 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 C6orf50Q9HD87 102 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
ZNF3-215ENST00000487620 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
ZNF3-215ENST00000487620 A0A087WUV0 522 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-215ENST00000487620 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-215ENST00000487620 MYMKA6NI61 221 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 EIF3HO15372 352 aaKnown RBP eCLIP10.83□□□□□ -0.68
ZNF3-215ENST00000487620 SLC1A4P43007 532 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
ZNF3-215ENST00000487620 TTMPQ5BVD1 217 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 ICE2Q659A1 982 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 EMBQ6PCB8 327 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 SMIM5Q71RC9 77 aa10.83□□□□□ -0.68
ZNF3-215ENST00000487620 ZNF572Q7Z3I7 529 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-215ENST00000487620 TGFBRAP1Q8WUH2 860 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms