RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TEX33O43247 280 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 CCDC113Q9H0I3 377 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 GSTTP1A0A1W2PQM5 241 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 POTEMA6NI47 508 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 AP5Z1O43299 807 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 NDUFA10O95299 355 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 RASA1P20936 1047 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 KCNJ6P48051 423 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 LRRC63Q05C16 580 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 NCBP1Q09161 790 aaKnown RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 ACTN4O43707 911 aaKnown RBP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRA2B-214ENST00000487615 AKR1B1P15121 316 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 SEMA3FQ13275 785 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 FAM178BQ8IXR5 827 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 IMPG2Q9BZV3 1241 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
TRA2B-214ENST00000487615 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 NR2F2P24468 414 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 PPP4CP60510 307 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 ALAS1P13196 640 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 BAG6P46379 1132 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 STAT2P52630 851 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 DPYDQ12882 1025 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 PLA2G4BP0C869 781 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TCP1P17987 556 aaKnown RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
TRA2B-214ENST00000487615 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
TRA2B-214ENST00000487615 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 AP3B2Q13367 1082 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 HYOU1Q9Y4L1 999 aa13.02□□□□□ -0.32
TRA2B-214ENST00000487615 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 RGL2O15211 777 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 STAT1P42224 750 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 CFAP58Q5T655 872 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 TXNRD3Q86VQ6 643 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 DDX12PQ92771 950 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 GJA10Q969M2 543 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 GH2P01242 217 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 CYP2J2P51589 502 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 KCNB1Q14721 858 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 RPS6KA1Q15418 735 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 SEPT7Q16181 437 aaKnown RBP13.02□□□□□ -0.33
TRA2B-214ENST00000487615 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
TRA2B-214ENST00000487615 A0A1B0GTH6 734 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 OAS2P29728 719 aaKnown RBP13.02□□□□□ -0.33
TRA2B-214ENST00000487615 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.33
TRA2B-214ENST00000487615 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 DYDC1Q8WWB3 177 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 EMILIN3Q9NT22 766 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
TRA2B-214ENST00000487615 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
TRA2B-214ENST00000487615 ENC1O14682 589 aa13.01□□□□□ -0.33
TRA2B-214ENST00000487615 RAD17O75943 681 aa13.01□□□□□ -0.33
TRA2B-214ENST00000487615 IVLP07476 585 aa13.01□□□□□ -0.33
TRA2B-214ENST00000487615 BCRP11274 1271 aa13.01□□□□□ -0.33
TRA2B-214ENST00000487615 NEFHP12036 1026 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms