RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 TSPY3P0CV98 308 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 TSPY8P0CW00 308 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 AMPD1P23109 780 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 MCM5P33992 734 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 SHMT1P34896 483 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 ANP32AP39687 249 aaKnown RBP8.99□□□□□ -0.97
GARNL3-218ENST00000487565 FGD1P98174 961 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-218ENST00000487565 MAP1SQ66K74 1059 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-218ENST00000487565 CDC37L1Q7L3B6 337 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 FOXP4Q8IVH2 680 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-218ENST00000487565 STAG2Q8N3U4 1231 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 KIF2CQ99661 725 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 C2orf49Q9BVC5 232 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-218ENST00000487565 ZNF341Q9BYN7 854 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 ZMYND15Q9H091 742 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 PGAP2Q9UHJ9 254 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 TACC3Q9Y6A5 838 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 ERICH2A1L162 156 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 MPHOSPH10O00566 681 aaKnown RBP8.98□□□□□ -0.97
GARNL3-218ENST00000487565 CPA1P15085 419 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 YY1P25490 414 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 ADH6P28332 368 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 NEK4P51957 841 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 ANTXR2P58335 489 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 PRAMEF18Q5VWM3 479 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 RUFY3Q7L099 469 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
GARNL3-218ENST00000487565 METTL16Q86W50 562 aaKnown RBP8.98□□□□□ -0.97
GARNL3-218ENST00000487565 IQCA1Q86XH1 822 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 ALDH16A1Q8IZ83 802 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 ZNF444Q8N0Y2 327 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-218ENST00000487565 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 HSH2DQ96JZ2 352 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 CCDC17Q96LX7 622 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 INCENPQ9NQS7 918 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 PDRG1Q9NUG6 133 aa8.98□□□□□ -0.97
GARNL3-218ENST00000487565 IFIT3O14879 490 aaKnown RBP8.97□□□□□ -0.97
GARNL3-218ENST00000487565 AKR1B1P15121 316 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TFAP4Q01664 338 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 ANKRD1Q15327 319 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 ABCB5Q2M3G0 1257 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 CERKLQ49MI3 558 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-218ENST00000487565 CCDC178Q5BJE1 867 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TMEM67Q5HYA8 995 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TMEM179Q6ZVK1 233 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 CYB5R4Q7L1T6 521 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 MIGA2Q7L4E1 593 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TMEM87BQ96K49 555 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TCEANC2Q96MN5 208 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 ZBTB21Q9ULJ3 1066 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 TNKSO95271 1327 aa8.97□□□□□ -0.97
GARNL3-218ENST00000487565 PAPPA2Q9BXP8 1791 aa8.96□□□□□ -0.97
GARNL3-218ENST00000487565 TRAF5O00463 557 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 SH2B2O14492 632 aaPredicted RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 GH2P01242 217 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 EPXP11678 715 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 IGFBP4P22692 258 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 ICA1Q05084 483 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 PRKG1Q13976 671 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 COL9A3Q14050 684 aaPredicted RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 WTAPQ15007 396 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 NOL8Q76FK4 1167 aaKnown RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 CHST3Q7LGC8 479 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 HSCBQ8IWL3 235 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 FAM200AQ8TCP9 573 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 SUSD3Q96L08 255 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 MTA3Q9BTC8 594 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 LRRC2Q9BYS8 371 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 ZNF408Q9H9D4 720 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 CABP5Q9NP86 173 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 AVENQ9NQS1 362 aaPredicted RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 PICK1Q9NRD5 415 aa8.96□□□□□ -0.98
GARNL3-218ENST00000487565 ANGEL1Q9UNK9 670 aaKnown RBP8.96□□□□□ -0.98
GARNL3-218ENST00000487565 MYH8P13535 1937 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 CCDC69A6NI79 296 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 GOLGA8BA8MQT2 603 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 NMT2O60551 498 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 CTNND1O60716 968 aaKnown RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 ASNSP08243 561 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 CAP2P40123 477 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 MCM2P49736 904 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 AK2P54819 239 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 SNRPNP63162 240 aaKnown RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 SFSWAPQ12872 951 aaKnown RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 IFIT1BQ5T764 474 aaKnown RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 ZNF468Q5VIY5 522 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-218ENST00000487565 DLK2Q6UY11 383 aa8.95□□□□□ -0.98
GARNL3-218ENST00000487565 Q6ZUG5 572 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms