RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
SPEN-205ENST00000487496 SCFD2Q8WU76 684 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 BADQ92934 168 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 MYL10Q9BUA6 226 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 TMEM39AQ9NV64 488 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 CABYRO75952 493 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 HSD17B4P51659 736 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 ARHGEF16Q5VV41 709 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 NFXL1Q6ZNB6 911 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 NEK1Q96PY6 1258 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 MAP3K20Q9NYL2 800 aaKnown RBP13.28□□□□□ -0.28
SPEN-205ENST00000487496 MROH7Q68CQ1 1323 aa13.28□□□□□ -0.28
SPEN-205ENST00000487496 NKRFO15226 690 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPEN-205ENST00000487496 TXNP10599 105 aaKnown RBP13.27□□□□□ -0.29
SPEN-205ENST00000487496 RAG1P15918 1043 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 EIF2AK2P19525 551 aaKnown RBP13.27□□□□□ -0.29
SPEN-205ENST00000487496 RXRAP19793 462 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.29
SPEN-205ENST00000487496 TTLL4Q14679 1199 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 STXBP2Q15833 593 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 TSGA10IPQ3SY00 556 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 SEPT14Q6ZU15 432 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 PIBF1Q8WXW3 757 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 COPS5Q92905 334 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 SPZ1Q9BXG8 430 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 PXMP2Q9NR77 195 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 TBX21Q9UL17 535 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
SPEN-205ENST00000487496 ARIH2O95376 493 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 NR3C2P08235 984 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CALM1P0DP23 149 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CALM2P0DP24 149 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CALM3P0DP25 149 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 GNAQP50148 359 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CPT1AP50416 773 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
SPEN-205ENST00000487496 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CCDC62Q6P9F0 684 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
SPEN-205ENST00000487496 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
SPEN-205ENST00000487496 POLR3EQ9NVU0 708 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
SPEN-205ENST00000487496 DNAH12Q6ZR08 3092 aa13.26□□□□□ -0.29
SPEN-205ENST00000487496 MYH6P13533 1939 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 LTBP2Q14767 1821 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 A6NJR5 290 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 GCOM1H8Y6P7 765 aaPredicted RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 TLR3O15455 904 aaKnown RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 EIF3JO75822 258 aaKnown RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 CD4P01730 458 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 MYL3P08590 195 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 POLR2MP0CAP2 368 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 PSMC6P62333 389 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 PURAQ00577 322 aaKnown RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 RAB11FIP4Q86YS3 637 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 RRP36Q96EU6 259 aaKnown RBP13.25□□□□□ -0.29
SPEN-205ENST00000487496 TCEANC2Q96MN5 208 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 SEZ6LQ9BYH1 1024 aa13.25□□□□□ -0.29
SPEN-205ENST00000487496 TIMP1P01033 207 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
SPEN-205ENST00000487496 EPHB4P54760 987 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 KRT32Q14532 448 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 SHHQ15465 462 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 LY6KQ17RY6 165 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 BRDTQ58F21 947 aaPredicted RBP13.24□□□□□ -0.29
SPEN-205ENST00000487496 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 VSIG10LQ86VR7 867 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 FANCBQ8NB91 859 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 KCNB2Q92953 911 aa13.24□□□□□ -0.29
SPEN-205ENST00000487496 MTG1Q9BT17 334 aaPredicted RBP13.24□□□□□ -0.29
SPEN-205ENST00000487496 SEC63Q9UGP8 760 aaKnown RBP13.24□□□□□ -0.29
SPEN-205ENST00000487496 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
SPEN-205ENST00000487496 KPNA6O60684 536 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 GH1P01241 217 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 FPGSQ05932 587 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 ARHGAP1Q07960 439 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 PGM5Q15124 567 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
SPEN-205ENST00000487496 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms