RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 CCDC144CPQ8IYA2 1237 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 POP1Q99575 1024 aaKnown RBP11.51□□□□□ -0.57
CDK11A-217ENST00000487462 C17orf80Q9BSJ5 609 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 TMX2Q9Y320 296 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 ATRXP46100 2492 aa11.51□□□□□ -0.57
CDK11A-217ENST00000487462 GJB5O95377 273 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
CDK11A-217ENST00000487462 SUPT20HL2P0C7V6 817 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 USP5P45974 858 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 ZXDAP98168 799 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 WDR63Q8IWG1 891 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDK11A-217ENST00000487462 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 RAD9AQ99638 391 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 PTPRCP08575 1304 aa11.5□□□□□ -0.57
CDK11A-217ENST00000487462 EP300Q09472 2414 aaPredicted RBP11.5□□□□□ -0.57
CDK11A-217ENST00000487462 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
CDK11A-217ENST00000487462 MICAL3Q7RTP6 2002 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 RBAK-RBAKDNI3L0D1 243 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 SMPD1P17405 629 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 AVPR2P30518 371 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 NBL1P41271 181 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 GPNMBQ14956 572 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 TMEM63BQ5T3F8 832 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
CDK11A-217ENST00000487462 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
CDK11A-217ENST00000487462 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 TMEM179Q6ZVK1 233 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 NOL8Q76FK4 1167 aaKnown RBP11.49□□□□□ -0.57
CDK11A-217ENST00000487462 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 TEX13BQ9BXU2 312 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 CLDND1Q9NY35 253 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
CDK11A-217ENST00000487462 CEP250Q9BV73 2442 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 DYNC1LI2O43237 492 aaPredicted RBP11.48□□□□□ -0.57
CDK11A-217ENST00000487462 MBTPS2O43462 519 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 ZEB2O60315 1214 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
CDK11A-217ENST00000487462 ICA1Q05084 483 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 DLX2Q07687 328 aaPredicted RBP11.48□□□□□ -0.57
CDK11A-217ENST00000487462 CLUL1Q15846 466 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 RPAINQ86UA6 219 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 ASIC4Q96FT7 647 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 AP5M1Q9H0R1 490 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
CDK11A-217ENST00000487462 ARHGEF10LQ9HCE6 1279 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
CDK11A-217ENST00000487462 LCTP09848 1927 aa11.48□□□□□ -0.57
CDK11A-217ENST00000487462 CYP7A1P22680 504 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 PTPROQ16827 1216 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 CTC1Q2NKJ3 1217 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 SH2D4AQ9H788 454 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 CTNNA3Q9UI47 895 aa11.47□□□□□ -0.57
CDK11A-217ENST00000487462 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
CDK11A-217ENST00000487462 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 STXBP3O00186 592 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 CLCN1P35523 988 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
CDK11A-217ENST00000487462 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 FAM83BQ5T0W9 1011 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 ADSSL1Q8N142 457 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 RETREG2Q8NC44 543 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 PPP1R13LQ8WUF5 828 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 RMDN1Q96DB5 314 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
CDK11A-217ENST00000487462 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.57
CDK11A-217ENST00000487462 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
CDK11A-217ENST00000487462 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
CDK11A-217ENST00000487462 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
CDK11A-217ENST00000487462 AKR1B1P15121 316 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 SMAD4Q13485 552 aaKnown RBP11.45□□□□□ -0.58
CDK11A-217ENST00000487462 EPC2Q52LR7 807 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 FAM117BQ6P1L5 589 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 NYAP1Q6ZVC0 841 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 ANKRD35Q8N283 1001 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 Q9Y3F1 56 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
CDK11A-217ENST00000487462 GREB1LQ9C091 1923 aaPredicted RBP11.45□□□□□ -0.58
CDK11A-217ENST00000487462 LOC730098B7Z3J9 87 aa11.44□□□□□ -0.58
CDK11A-217ENST00000487462 H3BNC9 293 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms