RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ASTN1O14525 1302 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 CNTNAP5Q8WYK1 1306 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 SYNRGQ9UMZ2 1314 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 DNM1LO00429 736 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 IGHA2P01877 340 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 BMP8BP34820 402 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 ADCYAP1R1P41586 468 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 TNFAIP2Q03169 654 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 SYTL5Q8TDW5 730 aaPredicted RBP11.79□□□□□ -0.52
NEK4-204ENST00000487068 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 GDF15Q99988 308 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 SENP6Q9GZR1 1112 aaPredicted RBP11.79□□□□□ -0.52
NEK4-204ENST00000487068 VTA1Q9NP79 307 aa11.79□□□□□ -0.52
NEK4-204ENST00000487068 GCOM1H8Y6P7 765 aaPredicted RBP11.78□□□□□ -0.52
NEK4-204ENST00000487068 POLR2MP0CAP2 368 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 MYCLP12524 364 aaPredicted RBP11.78□□□□□ -0.52
NEK4-204ENST00000487068 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
NEK4-204ENST00000487068 LRRC41Q15345 812 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 TLK2Q86UE8 772 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 NSUN6Q8TEA1 469 aaKnown RBP11.78□□□□□ -0.52
NEK4-204ENST00000487068 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
NEK4-204ENST00000487068 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 TAAR1Q96RJ0 339 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 COL6A3P12111 3177 aa11.78□□□□□ -0.52
NEK4-204ENST00000487068 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 HSD17B4P51659 736 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 RCAN1P53805 252 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 NAPAP54920 295 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 CCT2P78371 535 aaKnown RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 STK3Q13188 491 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 NBR1Q14596 966 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 DEFB123Q8N688 67 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 COL20A1Q9P218 1284 aa11.77□□□□□ -0.53
NEK4-204ENST00000487068 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
NEK4-204ENST00000487068 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 CPLX1O14810 134 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 OPLAHO14841 1288 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 ADCY6O43306 1168 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 CDC27P30260 824 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 ANAPC15P60006 121 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 STXBP2Q15833 593 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 SCFD2Q8WU76 684 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
NEK4-204ENST00000487068 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 MAF1Q9H063 256 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 KATNBL1Q9H079 304 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
NEK4-204ENST00000487068 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
NEK4-204ENST00000487068 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 DYNC1LI2O43237 492 aaPredicted RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 SMPD1P17405 629 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 CCND2P30279 289 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 BEX3Q00994 111 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 TTLL4Q14679 1199 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 IQSEC1Q6DN90 963 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 Q7L0L9 218 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 TDHQ8IZJ6 230 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 SAMD3Q8N6K7 520 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 PCSK9Q8NBP7 692 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 SLC26A6Q9BXS9 759 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 STARD7Q9NQZ5 370 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 STXBP5LQ9Y2K9 1186 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms